PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3wt9A_

Fold library id	PDB Header	Molecule	Title
c3wt9A_	PDB header: proton transport	Chain: A: PDB Molecule: rhodopsin i;	PDBTitle: crystal structure of the cell-free synthesized membrane protein,2 acetabularia rhodopsin i, at 1.48 angstrom

Links to external resources
Added to library: Sat Apr 11 08:16:59 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S N P N P F Q T T L G T D A Q W V V F A V M A L A A I V F S I A V Q F R P L P L R L T Y Y V N I A I C T I A A T A Y Y A M A V N G G D N K P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
T T S
G G G G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T A G T G A D E R Q V I Y A R Y I D W V F T T P L L L L D L V L L T N M P A T M I A W I M G A D I A M I A F G I I G A F T V G S Y K W F Y F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
G G G
T T B
S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V V G C I M L A V L A W G M I N P I F K E E L Q K H K E Y T G A Y T T L L I Y L I V L W V I Y P I V W G L G A G G H I I G V D V E I I A M G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G B S
T T T T T T T
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . .

Sequence I L D L L A K P L Y A I G V L I T V E V V Y G K L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	N	P	N	P	F	Q	T	T	L	G	T	D	A	Q	W	V	V	F	A	V	M	A	L	A	A	I	V	F	S	I	A	V	Q	F	R	P	L	P	L	R	L	T	Y	Y	V	N	I	A	I	C	T	I	A	A	T	A	Y	Y	A	M	A	V	N	G	G	D	N	K	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		S																												T	T	S		G	G	G																									G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	A	G	T	G	A	D	E	R	Q	V	I	Y	A	R	Y	I	D	W	V	F	T	T	P	L	L	L	L	D	L	V	L	L	T	N	M	P	A	T	M	I	A	W	I	M	G	A	D	I	A	M	I	A	F	G	I	I	G	A	F	T	V	G	S	Y	K	W	F	Y	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		G	G	G																									T	T	B																													S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	V	G	C	I	M	L	A	V	L	A	W	G	M	I	N	P	I	F	K	E	E	L	Q	K	H	K	E	Y	T	G	A	Y	T	T	L	L	I	Y	L	I	V	L	W	V	I	Y	P	I	V	W	G	L	G	A	G	G	H	I	I	G	V	D	V	E	I	I	A	M	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					G	G	G	B	S		T	T	T																									T	T	T	T			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Sequence	I	L	D	L	L	A	K	P	L	Y	A	I	G	V	L	I	T	V	E	V	V	Y	G	K	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T