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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3wsxA_

Fold library idPDB HeaderMoleculeTitle
c3wsxA_PDB header: protein bindingChain: A: PDB Molecule: sortilin-related receptor;PDBTitle: sorla vps10p domain in ligand-free form


Added to library: Sat Feb 7 08:46:00 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PIKVYGQVSLNDSHNQMVVHWAGEKSNVIVALARDSPKSSDVYVSYDYGKSFKKISDKLNFGLGNRSEAV
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Known secondary structure (DSSP)





S

TT







SSTTS


GGGS


TT





 .........80.........90.........100.........110.........120.........130.........140
Sequence IAQFYHSPADNKRYIFADAYAQYLWITFDFCNTLQGFSIPFRAADLLLHSKASNLLLGFDRSHPNKQLWK
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Known secondary structure (DSSP)
SS
TT
SSSSSSTTSS

SS

S
SS
TT

SSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SDDFGQTWIMIQEHVKSFSWGIDPYDKPNTIYIERHEPSGYSTVFRSTDFFQSRENQEVILEEVRDFQLR
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Known secondary structure (DSSP) SSTTSS
SS

TTTS
TT


TTS
SSTT

GGGS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DKYMFATKVVHQQSSVQLWVSFGRKPMRAAQFVTRHPINEYYIADASEDQVFVCVSHSNNRTNLYISEAE
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Known secondary structure (DSSP) TT



TT



B


SS



B
SSSS


GGG

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence GLKFSLSLENVLYYSPGGAGSDTLVRYFANEPFADFHRVEGLQGVYIATLINMRSVITFDKGGTWEFLQA
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Known secondary structure (DSSP) S
B
B





S

SB



TTS
SBS
TTSSS



SSTTSS

 .........360.........370.........380.........390.........400.........410.........420
Sequence PGCSLHLAQMPILSKESAPGLIIATGSVGKKTNVYISSSAGARWREALPGPHYYTWGDHGGIITAIAQGM
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Known secondary structure (DSSP)





B

TTSTT




SSTTSS
S
GGGT
SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence ETNELKYSTNEGETWKTFIFSEKPVFVYGLLTEPGEKSTVFTIFGSNHSWLILQVNATDALGVPCTENDY
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Known secondary structure (DSSP)
B
SSTTSS


SS
B
SSTT





GGGG
SB

GGG
 .........500.........510.........520.........530.........540.........550.........560
Sequence KLWSPSDERGNECLLGHKTVFKRRTPHATCFNGEDFDRPVVVSNCSCTREDYECDFGFKMSEDLSLEVCV
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Known secondary structure (DSSP)



TT



BTT
SS

SB





S
S



GGG
TT
SSGGG

 .........570.........580.........590.........600......
Sequence PDPEFSGKSYSPVGSTYRRTRGYRKISGDTCSGGDVEARLEGELVP
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Known secondary structure (DSSP)
GGGTT
TT



S


S
TT




STTTTTTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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