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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3wo9A_

Fold library idPDB HeaderMoleculeTitle
c3wo9A_PDB header: immune systemChain: A: PDB Molecule: variable lymphocyte receptor c;PDBTitle: crystal structure of the lamprey variable lymphocyte receptor c


Added to library: Sat Mar 8 08:30:15 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HMACLAVGKDDICTCSNKTDSSPETVDCSSKKLTAVPTGIPANTEKLQLDFNQLANIPAEAFHGLTRLTY
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Known secondary structure (DSSP)

STTSSS

BTTB
S
TTS

SS

S


TT
S

SS

S


TTTTTT
TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence LALDYNQLQSLPVGVFDQLNNLNELRLQDNQLTSLPPGVFDSLTKLTYLTLSQNQLQSIPAGVFDKLTNL
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Known secondary structure (DSSP)

SS

S


TTTTTT
TT



SS





TTTTTT
TT



SS

S


TTTTTT
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence NRLELSTNQLQSVPHGAFDSLVNLETLHLELNPWDCACSDIIYLRTFIAKNTDKISGMESAQCNGTSTAV
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Known secondary structure (DSSP)


SS

S


TTTTTT
TT



S

B
TTSTTTTTSBS
TT
BBTTTSSBG
 .........220...
Sequence KDVNTEKIKNVTC
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Known secondary structure (DSSP) GG


TTTTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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