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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3wmeA_

Fold library idPDB HeaderMoleculeTitle
c3wmeA_PDB header: transport proteinChain: A: PDB Molecule: atp-binding cassette, sub-family b, member 1;PDBTitle: crystal structure of an inward-facing eukaryotic abc multidrug2 transporter


Added to library: Sat Mar 22 11:38:54 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TGVTARRIFALAWSSSATMIVIGFIASILEGATLPAFAIVFGRMFQVFTKSKSQIEGETWKYSVGFVGIG
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Known secondary structure (DSSP)
TTTTS
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence VFEFIVAGSRTALFGIASERLARDLRVAAFSNLVEQDVTYFDRRKAGELGGKLNNDVQVIQYSFSKLGAV
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Known secondary structure (DSSP) TTS
TS
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LFNLAQCVVGIIVAFIFAPALTGVLIALSPLVVLAGAAQMIEMSGNTKRSSEAYASAGSVAAEVFSNIRT
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Known secondary structure (DSSP)
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TKAFEAERYETQRYGSKLDPLYRLGRRRYISDGLFFGLSMLVIFCVYALALWWGGQLIARGSLNLGNLLT
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Known secondary structure (DSSP) TT
TTS

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence AFFSAILGFMGVGQAAQVWPDVTRGLGAGGELFAMIDRVPQYRRPDPGAEVVTQPLVLKQGIVFENVHFR
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Known secondary structure (DSSP)








TT


B
S



SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence YPTRMNVEVLRGISLTIPNGKTVAIVGGSGAGKSTIIQLLMRFYDIEPQGGGLLLFDGTPAWNYDFHALR
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Known secondary structure (DSSP)
TTSTTSTT
S
TTSS


TTT

TTGGGB
 .........430.........440.........450.........460.........470.........480.........490
Sequence SQIGLVSQEPVLFSGTIRDNILYGKRDATDEEVIQALREANAYSFVMALPDGLDTEVGERGLALSGGQKQ
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Known secondary structure (DSSP) TT
SS



STS
TT

TT
TSSSGGG
STTSB


 .........500.........510.........520.........530.........540.........550.........560
Sequence RIAIARAILKHPTLLCLDESTSALDAESEALVQEALDRMMASDGVTSVVIAHRLSTVARADLILVMQDGV
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Known secondary structure (DSSP) T

S






SSTSTT


S
STT
 .........570.........580........
Sequence VVEQGNHSELMALGPSGFYYQLVEKQLA
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Known secondary structure (DSSP)
TT
TTST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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