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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3wj9A_

Fold library idPDB HeaderMoleculeTitle
c3wj9A_PDB header: translationChain: A: PDB Molecule: eukaryotic translation initiation factor 2a;PDBTitle: crystal structure of the eukaryotic initiation factor


Added to library: Sat Mar 15 08:53:02 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QKSQFAYRSSKSIGLVNASENYASPPKFEAISEPARNACYSPNGKLFAYATATQVVINDTESGAKLTQLP
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Known secondary structure (DSSP)


SS
GGGTSB

TT



SS

TTSSSS
TTT


 .........80.........90.........100.........110.........120.........130.........140
Sequence AANTYELGFSPLGKYLSTWERPGKEADGTPKQNXKVWNTETGQLVFSFVQRNQTGWNLQYTCDESLAARL
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Known secondary structure (DSSP)

S
TTSS


B
TTS
B


SSS





STT
S

TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VTNEVHFYETGNXSKGPIAKLRVEGISDFALSPGQNHAVAVFIPEKKGAPASVRTYSIPNFNSPLSQKTF
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Known secondary structure (DSSP) TTSTT
TT

S


SS



SSS


BTTB
SS
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence FKADKVQFKWNALGTSLLVLTQDKSNKNYYGETTGQFDLDREGPIHDVCWNADSKEFGIVYGYXPAKTAI
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Known secondary structure (DSSP) SS
S



SSTT












SSS

TTSS
SSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence FDNRANVVSIIPPAPRNTLIFSPNSRYILLAGFGNLQGSIDIFDAANNXKKITTVEAANCTYCEFSPDSQ
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Known secondary structure (DSSP)
SSS
S


TTSS

SSSS
GGGTS
TT


TTSS
 .........360.........370.........380.........390......
Sequence FLLTAVTSPRLRVDNSIKIWHITGAPXFYEEFNELYQAFWRPRPLN
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Known secondary structure (DSSP)
TTT
SS

SSS

SS


S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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