Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3wbkB_

Fold library idPDB HeaderMoleculeTitle
c3wbkB_PDB header: biosynthetic proteinChain: B: PDB Molecule: eukaryotic translation initiation factor 5b;PDBTitle: crystal structure analysis of eukaryotic translation initiation factor2 5b and 1a complex


Added to library: Sat Nov 22 08:30:12 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DLRSPICCILGHVDTGKTKLLDKIRQTGITQQIGATYFPIDAIKAKTKVMAEYEKQTFDVPGLLVIDTPG
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)






GGGT




SSSGGGGGTS




SS



 .........80.........90.........100.........110.........120.........130.........140
Sequence HESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLRDRKAPFVVALNKIDRLYDWKAIPNNSFRDS
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) TTB
SS
BS
STTT


T


GGGSTT



TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence FAKQSRAVQEEFQSRYSKIQLELAEQGLNSELYFQNKNMSKYVSIVPTSAVTGEGVPDLLWLLLELTQKR
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) TS
TT

GGG
S
TTTS

TTT
TTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence MSKQLMYLSHVEATILEVKVVEGFGTTIDVILSNGYLREGDRIVLCGMNGPIVTNIRALLTPQPLRLKSE
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) S


SS
TTTSTT


TTS










 .........290.........300.........310.........320.........330.........340.........350
Sequence YVHHKEVKAALGVKIAANDLEKAVSGSRLLVVGPEDDEDELMDDVMDDLTGLLDSVDTTGKGVVVQASTL
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)
SSS

TT
TT

TT


SSS
TTTT



SS

SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence GSLEALLDFLKDMKIPVMSIGLGPVYKRDVMKASTMLEKAPEYAVMLCFDVKVDKEAEQYAEQEGIKIFN
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) T


SS


STT

SS


TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence ADVIYHLFDSFTAYQEKLLEERRKDFLDYAIFPCVLQTLQIINKRGPMIIGVDVLEGTLRVGTPICAVKT
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP)
SSS




SSSTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence DPTTKERQTLILGKVISLEINHQPVQEVKKGQTAAGVAVRLEDPSGQQPIWGRHVDENDTLYSLVSRRSI
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) TTTTTTSTTS
SS


SS



BTTTB
TTS



 .........570.........580.........590
Sequence DTLKDKAFRDQVARSDWLLLKKLKVVFGIE
Predicted secondary structure


SS confidence





























Known secondary structure (DSSP) TTSTT

T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D