Fold library entry viewer: c3wajA_

Added to library: Sat Nov 2 08:52:43 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	V	L	V	I	A	A	L	I	S	V	K	L	R	I	L	N	P	W	N	S	V	F	T	W	T	V	R	L	G	G	N	D	P	W	Y	Y	Y	R	L	I	E	N	T	I	H	N	F	P	H	R	I	W	F	D	P	F	T	Y	Y	P	Y	G	S	Y	T	H	F	G	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T											T	T	T	T					B	S	S	S	B				S	S															T	T	T				S			T	T	S	T	T	T	T						S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	L	V	Y	L	G	S	I	A	G	I	I	F	S	A	T	S	G	E	S	L	R	A	V	L	A	F	I	P	A	I	G	G	V	L	A	I	L	P	V	Y	L	L	T	R	E	V	F	D	K	R	A	A	V	I	A	A	F	L	I	A	I	V	P	G	Q	F	L	Q	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T			S																		T	T												S													T	T			S					T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	I	L	G	F	N	D	H	H	I	W	E	A	F	W	Q	V	S	A	L	G	T	F	L	L	A	Y	N	R	W	K	G	H	D	L	T	A	R	Q	M	A	Y	P	V	I	A	G	I	T	I	G	L	Y	V	L	S	W	G	A	G	F	I	I	A	P	I	I	L	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	T	T				S																				T	T	S	S	S					T	T	T	S																		G	G	G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	M	F	F	A	F	V	L	A	G	F	V	N	A	D	R	K	N	L	S	L	V	A	V	V	T	F	A	V	S	A	L	I	Y	L	P	F	A	F	N	Y	P	G	F	S	T	I	F	Y	S	P	F	Q	L	L	V	L	L	G	S	A	V	I	A	A	A	F	Y	Q	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T																								G	G	G	T	T	S	S	S	S			S	S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	W	N	D	V	G	F	F	E	R	V	G	L	G	R	K	G	M	P	L	A	V	I	V	L	T	A	L	I	M	G	L	F	F	V	L	T	N	A	V	L	H	F	G	A	L	F	F	F	G	M	A	G	I	L	Y	S	A	Y	R	F	L	K	R	R	S	F	P	E	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T					T	T		G	G	G																					T							T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	L	L	I	W	A	I	A	M	F	I	A	L	W	G	Q	N	R	F	A	Y	Y	F	A	A	V	S	A	V	Y	S	A	L	A	L	S	V	V	F	D	K	L	H	F	R	V	A	F	A	L	L	I	A	L	A	A	I	Y	P	T	Y	I	L	A	D	A	Q	S	S	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	S	S		G	G	G	T																			G	G	G					T	T	T																			S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	G	G	P	N	K	Q	W	Y	D	A	L	T	W	M	R	E	N	T	P	D	G	E	K	Y	D	E	Y	Y	L	Q	L	Y	P	T	P	Q	S	N	K	E	P	F	S	Y	P	F	E	T	Y	G	V	I	S	W	W	D	Y	G	H	W	I	E	A	V	A	H	R	M	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																S	S										T	S						S			S	S					S	S									G	G	G
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	I	A	N	P	F	Q	A	G	I	G	N	K	Y	N	N	V	P	G	A	S	S	F	F	T	A	E	N	E	S	Y	A	E	F	V	A	E	K	L	N	V	K	Y	V	V	S	D	I	E	M	E	T	G	K	Y	Y	A	M	A	V	W	A	E	G	D	L	P	L	A	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			T	T	S		S			B	T	T	T	T	B		S						T		S	S											T	T												T	T	T										S	S					G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Y	Y	G	G	Y	F	Y	Y	S	P	T	G	T	F	G	Y	A	N	S	Q	W	D	I	P	L	N	S	I	I	I	P	L	R	I	P	S	E	L	Y	Y	S	T	M	E	A	K	L	H	L	F	D	G	S	G	L	S	H	Y	R	M	I	Y	E	S	D	Y	P	A	E	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	B								T	T							S	S	G	G	G	S		T	T					S				B		T	T	G	G	G	S							T	S	T	T	T	T		S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	K	S	Y	S	S	Q	V	N	L	N	N	E	S	Q	V	L	Q	T	A	L	Y	E	A	V	M	R	A	R	Y	G	V	S	P	T	M	G	T	Q	E	V	L	Y	K	Y	A	Y	T	Q	L	Y	E	K	K	M	G	I	P	V	K	I	A	P	S	G	Y	V	K	I	F	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	S		T	T																		T	T	T																				T			T	T	S					S					S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	R	V	K	G	A	V	V	T	G	K	V	S	A	N	V	T	E	V	S	V	N	A	T	I	K	T	N	Q	N	R	T	F	E	Y	W	Q	T	V	E	V	K	N	G	T	Y	T	V	V	L	P	Y	S	H	N	S	D	Y	P	V	K	P	I	T	P	Y	H	I	K	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S													T	T	S												B	T	T										S	S		S		S	S			S	S		B					T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.
Sequence	N	V	V	K	E	I	T	I	Y	E	S	Q	V	Q	N	G	E	I	I	Q	L	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T					B										T

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PDB structure

FASTA sequence

Hidden Markov model

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