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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3wa1A_

Fold library idPDB HeaderMoleculeTitle
c3wa1A_PDB header: toxinChain: A: PDB Molecule: binb protein;PDBTitle: crystal structure of protein


Added to library: Sat Jul 5 08:40:40 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TNYPLNTTPTSLNYNLPEISKKFYNLKNKYSRNGYGLSKTEFPSSIENCPSNEYSIMYDNKDPRFLIRFL
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Known secondary structure (DSSP)

S
SS



B





GGGSSS
SS



SS


STT



TTB
SSSB

 .........80.........90.........100.........110.........120.........130.........140
Sequence LDDGRYIIADRDDGEVFDEAPTYLDNNNHPIISRHYTGEERQKFEQVGSGDYITGEQFFQFYTQNKTRVL
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Known secondary structure (DSSP)
TTS
TTT


SS

GGG





GGG
B
TTT

TTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SNCRALDSRTILLSTAKIFPIYPPASETQLTAFVNSSFYAAAIPQLPQTSLLENIPEPTSLDDSGVLPKD
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Known secondary structure (DSSP) SS
SSS
S



SSS

GGGGGG







B









SSTT




GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence AVRAVKGSALLPCIIVHDPNLNNSDKMKFNTYYLLEYKEYWHQLWSQIIPAHQTVKIQERTGISEVVQNS
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Known secondary structure (DSSP)


GGG


TTS

S
TT


 .........290.........300.........310.........320.........330.........340.........350
Sequence MIEDLNMYIGADFGMYFYLRSSGFKEQITRGLNRPLSQTTTQLGERVEEMEYYNSNDLDVRYVKYALARE
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Known secondary structure (DSSP) SBTTS

TTT

B
S
SSB



SSS
 .........360.........370.........380.........
Sequence FTLKRVNGEIVKNWVAVDYRMAGIQSYPNAPITNPLTLT
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Known secondary structure (DSSP)
TTS
S
TTTS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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