Fold library entry viewer: c3w38A_

Added to library: Sat Jun 8 09:22:07 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	A	I	G	Y	G	Y	Q	V	K	N	A	K	V	D	N	S	T	G	K	S	L	T	A	L	L	Q	L	I	R	N	S	P	V	Y	G	P	D	I	Q	F	L	S	F	T	A	S	F	E	E	D	D	T	L	R	I	R	I	T	D	A	N	N	R	R	W	E	I	P	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S														S	S	S										S				S	T	T	S		B		S											T	T									T	T	S							T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	V	L	P	R	P	P	P	P	P	P	T	T	T	V	L	S	H	P	H	S	D	L	V	F	T	L	F	H	T	T	P	F	G	F	T	I	Y	R	K	S	T	H	D	V	L	F	D	A	T	P	I	P	S	N	P	T	T	F	L	I	Y	K	D	Q	Y	L	Q	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S																S	S		S									S	S								T	T	T											T	T		G	G	G	S					T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	S	L	P	A	Q	Q	A	H	L	Y	G	L	G	E	H	T	K	P	T	F	Q	L	A	H	N	Q	I	L	T	L	W	N	A	D	I	A	S	F	N	R	D	L	N	L	Y	G	S	H	P	F	Y	M	D	V	R	S	S	P	M	V	G	S	T	H	G	V	F	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T										B		S		S	S			S	S												T	T	S	B	S	S															S	S	S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	N	S	N	G	M	D	V	E	Y	T	G	D	R	I	T	Y	K	V	I	G	G	I	I	D	L	Y	I	F	A	G	R	T	P	E	M	V	L	D	Q	Y	T	K	L	I	G	R	P	A	P	M	P	Y	W	A	F	G	F	H	Q	C	R	W	G	Y	R	D	V	N	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S								S	S							S	S	S										S	S																				G	G	G	G	S						T	T			S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	T	V	V	D	K	Y	A	E	A	R	I	P	L	E	V	M	W	T	D	I	D	Y	M	D	A	F	K	D	F	T	L	D	P	V	H	F	P	L	D	K	M	Q	Q	F	V	T	K	L	H	R	N	G	Q	R	Y	V	P	I	L	D	P	G	I	N	T	N	K	S	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T										G	G	G	S	B	T	T	B	T	T				T	T	T	S															T	T									S						T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	T	F	I	R	G	M	Q	S	N	V	F	I	K	R	D	G	N	P	Y	L	G	S	V	W	P	G	P	V	Y	Y	P	D	F	L	D	P	A	A	R	S	F	W	V	D	E	I	K	R	F	R	D	I	L	P	I	D	G	I	W	I	D	M	N	E	A	S	N	F	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T		B				T	T								T	T						B		T	T	S																		S			S						S	T	T	T			S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	T	S	A	P	T	P	G	S	T	L	D	N	P	P	Y	K	I	N	N	S	G	G	R	V	P	I	N	S	K	T	I	P	A	T	A	M	H	Y	G	N	V	T	E	Y	N	A	H	N	L	Y	G	F	L	E	S	Q	A	T	R	E	A	L	V	R	T	S	N	E	R	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T		T	T	T	S		S	S				G	G	G	T	T			T	T	T	T	S			T	T				T	T	T							G	G	G															T	T		S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	F	L	L	S	R	S	T	F	A	G	S	G	K	Y	T	A	H	W	T	G	D	N	A	A	R	W	D	D	L	Q	Y	S	I	P	T	M	L	N	F	G	L	F	G	M	P	M	I	G	A	D	I	C	G	F	A	E	S	T	T	E	E	L	C	R	R	W	I	Q	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S		B	T	T	G	G	G	T							S		B	S	S																	T	T			S					B	T		S	B	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	F	Y	P	F	S	R	D	H	S	A	R	D	T	T	H	Q	E	L	Y	L	W	E	S	V	A	A	S	A	R	T	V	L	G	L	R	Y	Q	L	L	P	Y	Y	Y	T	L	M	Y	D	A	N	L	R	G	I	P	I	A	R	P	L	F	F	T	F	P	D	D	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S	S							T	T	S					T	T	S	S																	T																		S									T	T		G	G
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	T	Y	G	I	S	S	Q	F	L	I	G	R	G	I	M	V	S	P	V	L	Q	P	G	A	V	S	V	N	A	Y	F	P	R	G	N	W	F	S	L	F	N	Y	T	S	S	V	S	V	S	A	G	T	Y	V	S	L	S	A	P	P	D	H	I	N	V	H	I	H	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	T	T			S					T	T	T								S	T	T		S								S						T	T		T	T						S	S										T	T								T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	N	I	V	A	M	Q	G	E	A	M	T	T	Q	A	A	R	S	T	P	F	H	L	L	V	V	M	S	D	H	V	A	S	T	G	E	L	F	L	D	N	G	I	E	M	D	I	G	G	P	G	G	K	W	T	L	V	R	F	F	A	E	S	G	I	N	N	L	T	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S						T	S										S	S	S											S			S	S	T	T		T	T														S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.
Sequence	S	E	V	V	N	R	G	Y	A	M	S	Q	R	W	V	M	D	K	I	T	I	L	G	L	K	R	R	V	R	I	K	G	F	V	V	S	V	I	S	D	L	R	Q	L	V	G	Q	A	F	K	L	E	L	E	F	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T														S	S																			T	T	S

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PDB structure

FASTA sequence

Hidden Markov model

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