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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3vynB_

Fold library idPDB HeaderMoleculeTitle
c3vynB_PDB header: transferaseChain: B: PDB Molecule: probable conserved lipoprotein lpps;PDBTitle: crystal structure of mycobacterium tuberculosis l,d-transpeptidase2 ldtmt2 n55 truncation mutant (resideus 55-408)


Added to library: Sat Jun 22 08:32:40 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LVPKLTASVTDGAVGVTVDAPVSVTAADGVLAAVTMVNDNGRPVAGRLSPDGLRWSTTEQLGYNRRYTLN
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Known secondary structure (DSSP)



SS
TT


SS

SSS
TTS
B


TTSS
S


SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ATALGLGGAATRQLTFQTSSPAHLTMPYVMPGDGEVVGVGEPVAIRFDENIADRGAAEKAIKITTNPPVE
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Known secondary structure (DSSP)
TT




S
S
TT

TT

SS

S
S


 .........150.........160.........170.........180.........190.........200.........210
Sequence GAFYWLNNREVRWRPEHFWKPGTAVDVAVNTYGVDLGEGMFGEDNVQTHFTIGDEVIATADDNTKILTVR
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Known secondary structure (DSSP)
SSSS
SS


TT


BT
B
STTS




TTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VNGEVVKSMPTSMGKDSTPTANGIYIVGSRYKHIIMDSSTYGVPVNSPNGYRTDVDWATQISYSGVFVHS
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Known secondary structure (DSSP) TT
B
B
TTS


B


GGGGT

TTSSS



TTS
 .........290.........300.........310.........320.........330.........340.........
Sequence APWSVGAQGHTNTSHGCLNVSPSNAQWFYDHVKRGDIVEVVNTVGGTLPGIDGLGDWNIPWDQWRAGNA
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Known secondary structure (DSSP)
TTSTTTTTT


BSSS


TT
S
SS
B

TTSSS
GGGS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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