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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3vx4D_

Fold library idPDB HeaderMoleculeTitle
c3vx4D_PDB header: transport proteinChain: D: PDB Molecule: putative abc transporter, atp-binding protein coma;PDBTitle: crystal structure of the nucleotide-binding domain of s. mutans coma,2 a bifunctional atp-binding cassette transporter involved in the3 quorum-sensing pathway


Added to library: Sat Apr 20 11:14:41 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NSFLDGDISFENLSYKYGFGRDTLSDINLSIKKGSKVSLVGASGSGKTTLAKLIVNFYEPNKGIVRINGN
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Known secondary structure (DSSP)
GGG
S

SSSSS
S
TT
STTSSTTSS

STT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DLKVIDKTALRRHISYLPQQAYVFSGSIMDNLVLGAKEGTSQEDIIRACEIAEIRSDIEQMPQGYQTELS
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Known secondary structure (DSSP) TTTS

SS



STT

TT

TT
STTGGG
B
 .........150.........160.........170.........180.........190.........200.........210
Sequence DGAGISGGQKQRIALARALLTQAPVLILDAATSSLDILTEKKIISNLLQMTEKTIIFVAHRLSISQRTDE
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Known secondary structure (DSSP) TTBSS
TTT
SSTTTTS
T
TT

S
TTSS
 .........220.........230.........240
Sequence VIVMDQGKIVEQGTHKELLAKQGFYYNLFN
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Known secondary structure (DSSP) TT
TTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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