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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3vvfA_

Fold library idPDB HeaderMoleculeTitle
c3vvfA_PDB header: transport proteinChain: A: PDB Molecule: amino acid abc transporter, binding protein;PDBTitle: crystal structure of ttc0807 complexed with arginine


Added to library: Sat Jun 29 09:11:24 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GGSEFQVRSFEEIKRSGEIRIGTEGAFPPFNYFDERNQLTGFEVDLGNAIAERLGLKPRWIAQSFDTLLI
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Known secondary structure (DSSP)








T
STTT
TTS
STT


GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence QLNQGRFDFVIASHGITEERARAVDFTNPHYCTGGVIVSRKGGPRTAKDLQGKVVGVQVGTTYMEAAQKI
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Known secondary structure (DSSP) TS
S

TT
S
STTS

SGGGGBT
TTST
 .........150.........160.........170.........180.........190.........200.........210
Sequence PGIKEVRTYQRDPDALQDLLAGRIDTWITDRFVAKEAIKERKLENTLQVGELVFQERVAMAVAKGNKSLL
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Known secondary structure (DSSP) TTBSSSTTS
STT
TTTTT
 .........220.........230.........240..
Sequence DALNRALAELMQDGTYARISQKWFGEDVRCKR
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Known secondary structure (DSSP) SSSS






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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