Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3vu4B_

Fold library idPDB HeaderMoleculeTitle
c3vu4B_PDB header: protein transportChain: B: PDB Molecule: kmhsv2;PDBTitle: crystal structure of kluyvelomyces marxianus hsv2


Added to library: Wed Jan 9 15:42:00 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDD
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)





TTSS
SSTTTT
SS


TTSS
SSTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence VKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNL
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) TTT
SS




SSTTSSTT


SS
TT
SS
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence GQIHITKLQKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMK
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP) T






SS

TTSSTT
STTT



SS


 .........220.........230.........240.........250.........260.........270.........280
Sequence WSTDGSKLAVVSDKWTLHVFEIFNDQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKV
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)
TTSSTT
S





S



SS



SSSSTTTT
 .........290.........300.
Sequence VFDDEMERWLIQMDQREQLMI
Predicted secondary structure









SS confidence




















Known secondary structure (DSSP) TTTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D