Fold library entry viewer: c3vthA_

Added to library: Wed Jan 9 17:25:17 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	G	R	V	P	Q	I	Q	A	R	Q	I	N	I	F	G	I	V	Q	G	V	G	F	R	P	F	V	F	N	I	A	Q	K	Y	N	L	K	G	I	V	Y	N	N	S	S	G	L	Y	I	E	V	E	G	E	E	K	D	I	E	A	F	I	R	E	I	K	E	N	P	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																S	S	S	S												T	T									T	T																							S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	L	S	V	I	D	E	I	Q	V	R	E	V	E	V	K	E	Y	K	D	F	K	I	V	G	S	K	E	D	G	G	F	V	P	V	S	P	D	M	G	V	C	E	D	C	L	R	E	L	K	D	P	K	D	R	R	Y	R	Y	P	F	I	N	C	T	N	C	G	P	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																	S	S							B			S									B											T		T	T	S	T	T	T	T		T	T			B	T	T	B	B		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	S	I	I	E	D	I	P	Y	D	R	A	K	T	S	M	K	V	F	P	M	C	E	K	C	S	R	E	Y	H	D	P	H	D	R	R	F	H	A	Q	P	V	A	C	F	D	C	G	P	S	L	S	F	V	G	E	G	C	F	D	D	E	I	K	C	V	A	K	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	B		S	S	S			G	G	G	B	G	G	G	G	S											T		T	T	S	T	T	T	T		T	T				T	T	T	S							S	S				S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	E	G	K	I	V	A	I	K	G	I	G	G	F	H	L	A	V	N	A	L	D	D	E	A	V	A	T	L	R	R	R	K	K	R	Y	G	K	P	F	A	V	M	M	R	D	V	E	E	V	K	K	Y	C	I	V	S	P	E	E	E	R	L	L	L	S	Q	R	R	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T								S	S	S						B	T	T													T			S	S							S	S								B												S	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	V	L	L	K	K	K	G	E	K	L	A	K	G	I	A	D	D	L	D	T	L	G	V	M	L	P	Y	A	P	I	H	Y	L	L	M	E	E	I	D	F	P	I	V	M	T	S	G	N	V	S	E	E	P	I	C	K	D	N	E	E	A	L	E	K	L	K	D	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						B		S	S				T	T	S	S	T	T		S									S											S	S							S	S	S	T	T	S					S								T	T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	D	V	F	L	L	N	N	R	D	I	V	N	R	I	D	D	S	V	T	S	F	N	A	G	A	E	R	I	I	R	R	A	R	G	Y	A	P	Q	P	I	L	L	K	K	E	V	K	A	S	I	L	A	V	G	G	F	Y	K	N	T	F	C	M	T	K	G	H	Y	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S						S	S			S	S											T	T					S	B			T	T	T	T	T						S	S			S	S								S	T	T	B							T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	S	H	H	I	G	D	L	D	N	E	K	A	F	N	Y	Y	I	E	Q	I	E	R	Y	K	K	L	F	R	V	D	P	E	V	V	A	H	D	M	H	K	G	Y	L	S	T	Q	Y	A	K	S	L	D	L	P	K	I	E	V	Q	H	H	H	A	H	I	A	S	C	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						B				S																		T	T				S						S		T	T	S									S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	E	H	N	L	D	E	K	V	I	G	I	A	Y	D	G	T	G	Y	G	T	D	G	N	V	W	G	A	E	I	L	V	C	D	L	K	S	F	E	R	I	A	H	L	K	Y	K	P	L	P	G	N	E	L	A	I	K	K	I	Y	R	T	A	L	G	F	I	F	D	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T			S														T	T	S	S											S	S															S	T	T															G	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	I	S	F	Y	K	N	F	V	E	Q	V	D	S	R	E	L	D	I	I	L	K	Q	I	D	R	K	I	N	T	A	Y	V	S	S	M	G	R	F	F	D	A	V	A	A	L	I	G	V	R	K	E	V	L	F	E	G	Q	A	A	M	E	L	E	S	L	M	A	E	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	G							S															T	S	S																		T	T	S		S	S		S	S	T	T									T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	Y	Y	E	Y	E	I	L	K	E	D	R	Y	V	I	D	P	E	L	I	L	R	Q	I	Y	E	D	Y	M	K	G	F	E	K	S	Y	I	S	A	K	F	H	N	T	V	V	N	F	T	Y	D	L	A	N	L	I	R	K	E	T	G	I	N	K	V	V	L	S	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S	S																			T																																						S	G
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.
Sequence	S	F	Q	N	R	Y	L	L	R	R	L	I	E	K	L	S	L	S	G	F	E	V	Y	S	N	S	K	V	P	C	N	D	G	G	I	S	L	G	Q	A	V	I	A	N	K	I	L	E	G	S	A	W	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	S														T	T							S	S	S		S	S	G	G	G														T	S	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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