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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3vt2B_

Fold library idPDB HeaderMoleculeTitle
c3vt2B_PDB header: sugar binding proteinChain: B: PDB Molecule: ricin b lectin;PDBTitle: crystal structure of ct1,3gal43a in complex with isopropy-beta-d-2 thiogalactoside


Added to library: Wed Jan 9 14:47:04 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EGVIVNGTQFKDTSGNVIHAHGGGMLKHGDYYYWYGEYRDDSNLFLGVSCYRSKDLVNWEYRGEVLSRNS
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Known secondary structure (DSSP)

SSB

BBTTS
B


BT


SS


TTSS

SSSSSBTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence APELNHCNIERPKVMYNASTGEFVMWMHWENGINYGQARAAVAYSKTPDGKFTYIRSFRPMQDTGVMDHG
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Known secondary structure (DSSP)
GGGSS

TTT
S
SS
SS

SSSSS


SS
TT

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LPGYMSRDCNVFVDTDGKGYFISAANENMDLHLYELTPDYKNIASLKAKLFVGQQREAPCLIKRNGYYYL
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Known secondary structure (DSSP) B



S
TTS
TTTT
TTSSSSTTS




TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence ITSGCTGWNPNQAKYAYSKDLASGWSQLYNLGNSTTYRSQPTFIIPVQGSSGTSYLYMGDRWAGAWGGKV
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Known secondary structure (DSSP)
S
TTS


SSSSS




SSTTTTT

SS

GGGGT

G
 .........290.........300.........310.........320.........330.........340.........350
Sequence NDSQYVWLPLNFISDTTLELPYYDSVKIDASSGIISEYIPDTTRYKLVNKNSGKVLDVLDGSVDNAAQIV
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Known secondary structure (DSSP) GG
TT



STTTT

S



TTT

GGG

STT
 .........360.........370.........380.........390.........400.........410.........420
Sequence QWTDNGSLSQQWYLVDVGGGYKKIVNVKSGRALDVKDESKEDGGVLIQYTSNGGYNQHWKFTDIGDGYYK
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Known secondary structure (DSSP)




TTS

STT
SSSS
GGG

STT




GGG


STT
 .........430.........440.........450.........460.
Sequence ISSRHCGKLIDVRKWSTEDGGIIQQWSDAGGTNQHWKLVLV
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Known secondary structure (DSSP)
BBTTTS
GGG

STT




GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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