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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3vr5D_

Fold library idPDB HeaderMoleculeTitle
c3vr5D_PDB header: hydrolaseChain: D: PDB Molecule: v-type sodium atpase subunit b;PDBTitle: crystal structure of nucleotide-free enterococcus hirae v1-atpase2 [ev1(l)]


Added to library: Tue Jan 22 09:05:43 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EYRTIKEVVGPLXAVEKVSGVKYEELIEVRXQNGEIRRGQVLEVQEDKAXVQIFEGTSGINLKNSSVRFL
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Known secondary structure (DSSP)
B

TT
S

S

TT

TTS

SS
TT

TT

TTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence GHPLQLGVSEDXIGRVFDGLGRPKDNGPEILPEKYLDINGEVINPIARDYPDEFIQTGISAIDHLNTLVR
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Known secondary structure (DSSP) SS


GGGTT
TTS
BSS






STT




TTT



B
S
TTS

BT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GQKLPVFSGSGLPHKELAAQIARQATVLDSSDDFAVVFAAIGITFEEAEFFXEDFRQTGAIDRSVXFXNL
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Known secondary structure (DSSP) T
B


TTS

SS
S


SGGGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence ANDPAIERIATPRXALTAAEYLAYEKGXHVLVIXTDXTNYAEALREISAARREVPGRRGYPGYLYTNLAT
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Known secondary structure (DSSP) TTS
TT


TT



GGGS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence LFERAGRIRGLKGSVTQIPILTXPEDDKTHPIPDLTGYITEGQIILTRELYKSGIQPPIDVLPSLSRLKD
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Known secondary structure (DSSP) TS
TT
S

GGG
TTSSSB
TT
SS
B
TTT
TTGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence KGTGAGKTREDHAATXNQLFAAYAQGKQAKELAVVLGESALSDIDKIYAKFAERFENEYVNQGFYTNRTI
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Known secondary structure (DSSP) GS
STTTS
TT
TTS

TT


TT



 .........430.........440.........450..
Sequence TETLDLGWELLAXLPRTELKRIKDDLLDKYLP
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SS confidence































Known secondary structure (DSSP) TTS
TTT
TTS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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