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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3vr5C_

Fold library idPDB HeaderMoleculeTitle
c3vr5C_PDB header: hydrolaseChain: C: PDB Molecule: v-type sodium atpase catalytic subunit a;PDBTitle: crystal structure of nucleotide-free enterococcus hirae v1-atpase2 [ev1(l)]


Added to library: Tue Jan 22 09:04:32 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XQIGKIIKVSGPLVXAENXSEASIQDXCLVGDLGVIGEIIEXRQDVASIQVYEETSGIGPGEPVRSTGEA
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Known secondary structure (DSSP)


TT

TT

TTTTTTTTSS

TT

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LSVELGPGIISQXFDGIQRPLDTFXEVTQSNFLGRGVQLPALDHEKQWWFEATIEEGTEVSAGDIIGYVD
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Known secondary structure (DSSP) SSSS
TT

TT

BT
SS

SS



SS
TT


S
TT

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ETKIIQHKIXVPNGIKGTVQKIESGSFTIDDPICVIETEQGLKELTXXQKWPVRRGRPIKQKLNPDVPXI
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Known secondary structure (DSSP) SSSS


TT




TTS

TT
S
TTS





SB

 .........220.........230.........240.........250.........260.........270.........280
Sequence TGQRVIDTFFPVTKGGAAAVPGPFGAGKTVVQHQIAKWSDVDLVVYVGCGERGNEXTDVVNEFPELIDPN
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Known secondary structure (DSSP)


S

BTT


TTS
S

SS

GGG
B
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence TGESLXERTVLIANTSNXPVAAREASIYTGITIAEYFRDXGYDVAIXADSTSRWAEALREXSGRLEEXPG
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Known secondary structure (DSSP) T
SBGGGG
TTS
TTTTT
TTT

B
 .........360.........370.........380.........390.........400.........410.........420
Sequence DEGYPAYLGSRLAEYYERSGRVIALGSDQREGSITAISAVSPSGGDISEPVTQNTLRVVKVFWGLDSSLA
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Known secondary structure (DSSP) GGG
BTTTT
SSTT



GGG
TTSTT
S

B
 .........430.........440.........450.........460.........470.........480.........490
Sequence QKRHFPSINWIQSYSLYSTEVGRYXDQILQWSDXVTEGXRILQEEEQLNEIVRLVGIDSLSDNDRLTLEV
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Known secondary structure (DSSP) TT
SS
B
TTT
TT

TT
STT

 .........500.........510.........520.........530.........540.........550.........560
Sequence AKSIREDYLQQNAFDDVDTFTSREKQFNXLKVILTFGKEARKFNEIXEGRERISRSKYIPLAKISSINEE
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Known secondary structure (DSSP) TT


TTSTTTT






TGGG


T
 ...
Sequence IKE
Predicted secondary structure

SS confidence


Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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