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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3vqiE_

Fold library idPDB HeaderMoleculeTitle
c3vqiE_PDB header: protein transportChain: E: PDB Molecule: atg5;PDBTitle: crystal structure of kluyveromyces marxianus atg5


Added to library: Sat Aug 4 13:39:30 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MEELRERVWNGTINVEVVVSDAIVVPNTTLADKSCHIVMLRDAYLGFYLPTVVRKLADTIKVPYESDYRN
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Known secondary structure (DSSP)
TTT

TTTB
TT

TGGGSSS
GGGGGGGB
S

S
SSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence WWFEYNGEGVPWEYPCGVLFDLLNKLQMWELQLCHGDKYPRGILPLVDGHSQIKDYWRHQWKQACFILNG
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Known secondary structure (DSSP) TT

TTS






SS

TT




STS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SAKRIMSLSIPDFENFWVSILSRNRSDFMAVRSKLFSMNKAKSLPVRVWTSNYAVLQPTVPVTELSVAEL
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Known secondary structure (DSSP) SSS
T


GGG
S

TTS







B
 .........220.........230.........240.........250......
Sequence LDSIKLSSDGVKSVIIQGIDVSIEDNIFELYDIFASIDGFLYLVTK
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Known secondary structure (DSSP) TT


SS

TTTTSB

TTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) 437 168960 - 168969 DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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