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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3vn5A_

Fold library idPDB HeaderMoleculeTitle
c3vn5A_PDB header: hydrolaseChain: A: PDB Molecule: ribonuclease hiii;PDBTitle: crystal structure of aquifex aeolicus rnase h3


Added to library: Thu Jan 10 13:07:40 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PSLKISPSEAEKIQNYLVSSGFRKINAPYTLWALEGNGVKVYYYKTGSLLIQGKNSEKVLKEVLNLLEKK
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Known secondary structure (DSSP)


TT



TT
STT
TTSSTTTTS
GG
 .........80.........90.........100.........110.........120.........130.........140
Sequence KLPGCDESGKGDIFGSLVLCCVCIPEENYLKVSSLNPRDTKRLSDKRVERLYLALKPLVKAYCYEIKPEE
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Known secondary structure (DSSP) GS
STT
SBS


GGGT
TT

TTT
GGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence YNKLYRKFRNLNKMMTHFYKLLIERVKEECGVSEVVVDKYQPSNPFGEDVIFETEAERNLAVAVASIFAR
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Known secondary structure (DSSP) SST
S



SSS

S
TT
BTTB

 .........220.........230.........240.........250.....
Sequence YKFLQSLKEVERELGIKIPKGTSKEVKELAKSLKNPERFIKLNFN
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Known secondary structure (DSSP)
S



S

T
SSGGGTB
GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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