PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3vmtA_

Fold library id	PDB Header	Molecule	Title
c3vmtA_	PDB header: transferase	Chain: A: PDB Molecule: monofunctional glycosyltransferase;	PDBTitle: crystal structure of staphylococcus aureus membrane-bound2 transglycosylase in complex with a lipid ii analog

Links to external resources
Added to library: Sat Apr 21 12:31:47 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence R I L L K I L L T I L I I I A L F I G I M Y F L S T R D N V D E L R K I E N K S S F V S A D N M P E Y V K G A F I S M E D E R F Y N H H G F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S
G G G G G G G G G S T T
G G G S
T T T T T S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D L K G T T R A L F S T G G S T I T Q Q V V K N Y F Y D N D R S F T R K V K E L F V A H R V E K Q Y N K N E I L S F Y L N N I Y F G D N Q Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
S S
S S
T S S
S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T L E G A A N H Y F G T T V N K N S T T M S H I T V L Q S A I L A S K V N A P S V Y N I N N M S E N F T Q R V S T N L E K M K Q Q N Y I N E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
B
T T
S S
B
S
T T
T T S
T T S S

. . . . . . . . . 220 . .

Sequence T Q Y Q Q A M S Q L N R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	I	L	L	K	I	L	L	T	I	L	I	I	I	A	L	F	I	G	I	M	Y	F	L	S	T	R	D	N	V	D	E	L	R	K	I	E	N	K	S	S	F	V	S	A	D	N	M	P	E	Y	V	K	G	A	F	I	S	M	E	D	E	R	F	Y	N	H	H	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T																						S		S		G	G	G	G	G	G	G	G	G	S	T	T				G	G	G	S														T	T	T	T	T	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	L	K	G	T	T	R	A	L	F	S	T	G	G	S	T	I	T	Q	Q	V	V	K	N	Y	F	Y	D	N	D	R	S	F	T	R	K	V	K	E	L	F	V	A	H	R	V	E	K	Q	Y	N	K	N	E	I	L	S	F	Y	L	N	N	I	Y	F	G	D	N	Q	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T																		S	S				S																	S											T	S	S			S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	L	E	G	A	A	N	H	Y	F	G	T	T	V	N	K	N	S	T	T	M	S	H	I	T	V	L	Q	S	A	I	L	A	S	K	V	N	A	P	S	V	Y	N	I	N	N	M	S	E	N	F	T	Q	R	V	S	T	N	L	E	K	M	K	Q	Q	N	Y	I	N	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S										S		B			T	T			S	S		B															S		T	T			T	T	S																			T	T	S	S
	.	.	.	.	.	.	.	.	.	220	.	.
Sequence	T	Q	Y	Q	Q	A	M	S	Q	L	N	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T