Fold library entry viewer: c3vmpA_

Added to library: Sat Feb 18 10:57:20 2012
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	N	M	I	N	L	T	T	D	K	A	V	Y	Q	A	G	E	A	V	H	L	N	L	T	L	N	N	T	T	S	L	A	Q	N	I	T	A	T	A	E	V	Y	S	L	E	N	K	L	K	T	L	Q	Y	T	K	Y	L	L	P	N	E	S	Y	T	T	Q	K	G	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S						S		S	S	B		T	T	S												S	S	S													T	T														T	T							T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	I	P	A	N	S	L	A	N	N	R	G	Y	L	L	K	V	N	I	S	D	S	Q	N	N	I	L	E	Q	G	N	R	A	I	A	V	E	D	D	W	R	T	F	P	R	Y	A	A	I	G	G	S	Q	K	D	N	N	S	V	L	T	K	N	L	P	D	Y	Y	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		S		S	S												T	T															S	S	T	T	S	S									B	G	G	G	T	T	B	B		G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	E	Q	M	K	N	M	N	I	N	S	Y	F	F	Y	D	V	Y	K	S	A	T	N	P	F	P	N	V	P	K	F	D	Q	S	W	N	W	W	S	H	S	Q	V	E	T	D	A	V	K	A	L	V	N	R	V	H	Q	T	G	A	V	A	M	L	Y	N	M	I	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T								S			S	B	T	T	B		S		S	S	S					T	T		T	T	T																			T	T									S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Q	N	A	N	E	T	A	V	L	P	D	T	E	Y	I	Y	N	Y	E	T	G	G	Y	G	Q	N	G	Q	V	M	T	Y	S	I	D	D	K	P	L	Q	Y	Y	Y	N	P	L	S	K	S	W	Q	N	Y	I	S	N	A	M	A	Q	A	M	K	N	G	G	F	D	G	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S			S	S		G	G	G	B				S	S	S	B	T	T	B		B	T	S	B						T	T							B		T	T																				T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	G	D	T	I	G	D	N	R	V	L	S	H	N	Q	K	D	S	R	D	I	A	H	S	F	M	L	S	D	V	Y	A	E	F	L	N	K	M	K	E	K	L	P	Q	Y	Y	L	T	L	N	D	V	N	G	E	N	I	S	K	L	A	N	S	K	Q	D	V	I	Y	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S								G	G	G	T	T				G	G	G																			S	T	T	S							G	G	G	T	T					T	T	S			S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	L	W	P	F	G	T	S	A	L	G	N	R	P	Q	E	S	Y	G	D	L	K	A	R	V	D	Q	V	R	Q	A	T	G	K	S	L	I	V	G	A	Y	M	E	E	P	K	F	D	D	N	R	I	P	L	N	G	A	A	R	D	V	L	A	S	A	T	Y	Q	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S	B		T	T	S	S	S	B	S		B																S														B		T	T			B	S	S								T	T		B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	V	L	L	T	T	A	A	I	A	A	A	G	G	Y	H	M	S	L	A	A	L	A	N	P	N	D	G	G	G	V	G	V	L	E	T	A	Y	Y	P	T	Q	S	L	K	V	S	K	E	L	N	R	K	N	Y	H	Y	Q	Q	F	I	T	A	Y	E	N	L	L	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T												G	G	G	T	T	S						S	S	S	T	T				S	B																			T					S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	V	E	N	D	S	A	E	P	Q	T	F	T	A	N	G	R	Q	L	S	Q	D	A	L	G	I	N	G	D	Q	V	W	T	Y	A	K	K	G	N	D	F	R	T	I	Q	L	L	N	L	M	G	I	T	S	D	W	K	N	E	D	G	Y	E	N	N	K	T	P	D	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					S	S							T	T	S		B					T	T	S		S		S	S									S	S										T	T	S			B	S	S		T	T	G	G	G	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Q	T	N	L	L	V	T	Y	P	L	T	G	V	S	M	A	E	A	D	R	I	A	K	Q	V	Y	L	T	S	P	D	D	W	L	Q	S	S	M	I	S	L	A	T	Q	V	K	T	N	E	N	G	D	P	V	L	Y	I	Q	V	P	R	L	T	L	W	D	M	I	Y	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T											T	S						S	S	T	T	T	T	T													T	T	S												S	S
	.	.
Sequence	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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