Fold library entry viewer: c3vlmB_

Added to library: Fri Jan 11 00:15:17 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	K	L	N	L	E	I	L	D	Q	N	A	R	D	V	G	P	V	E	D	Y	A	E	E	F	Q	K	L	D	L	E	A	V	K	S	D	L	E	E	L	M	T	S	S	Q	D	W	W	P	A	D	Y	G	H	Y	G	P	L	F	I	R	M	A	W	H	S	A	G	T	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T					G	G	G	S			S	S									T	T	S													T	T				T	T	S			G	G	G																T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	T	A	D	G	R	G	G	A	A	G	G	R	Q	R	F	A	P	I	N	S	W	P	D	N	A	N	L	D	K	A	R	R	L	L	L	P	I	K	Q	K	Y	G	Q	K	I	S	W	A	D	L	M	I	L	A	G	N	V	A	I	E	S	M	G	F	K	T	F	G	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	S		S	S	S	T	T		G	G	G	S	T	T	G	G	G		G	G	G	T	T							T	T								G	G	G	S																T	T	T				S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	G	G	R	E	D	A	F	E	E	D	K	A	V	N	W	G	L	I	Y	V	N	P	E	G	P	D	G	N	P	D	P	E	A	S	A	K	N	I	R	Q	T	F	D	R	A	A	M	N	D	K	E	T	A	A	L	I	A	G	G	H	T	F	G	K	V	H	G	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B						S	S			T	T						S	S			T	T		G	G	G																	T	T	T															T	S					B	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	P	E	E	N	L	G	P	E	P	E	A	A	P	I	E	Q	Q	G	L	G	W	Q	M	I	T	S	G	I	E	G	P	W	T	Q	S	P	T	E	W	D	M	G	Y	I	N	N	L	L	D	Y	E	W	E	P	E	K	G	P	G	G	A	W	Q	W	A	P	K	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										G	G	G	S		G	G	G	T	T						B	S	S	S					S	S	S	S	T	T	S		S	T									S								T	T	S	S						S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	L	K	N	S	V	P	D	A	H	D	P	D	E	K	Q	T	P	M	M	L	T	T	D	I	A	L	K	R	D	P	D	Y	R	E	V	M	E	T	F	Q	E	N	P	M	E	F	G	M	N	F	A	K	A	W	Y	K	L	T	H	R	D	M	G	P	P	E	R	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	T	T					S	S		T	T							B										S																													T	T	T	T	S		S	G	G	G		B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	P	E	V	P	D	E	E	M	I	W	Q	D	P	L	P	D	A	D	Y	D	L	I	G	D	E	E	I	A	E	L	K	E	E	I	L	D	S	D	L	S	V	S	Q	L	V	K	T	A	W	A	S	A	S	T	Y	R	D	S	D	K	R	G	G	A	N	G	A	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T	S		S	S			G	G	G								S	B																T	S	S															T	T			T	T	T					S	T	B		G	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	R	L	E	P	Q	K	N	W	E	V	N	E	P	E	Q	L	E	T	V	L	G	T	L	E	N	I	Q	T	E	F	N	D	S	R	S	D	G	T	Q	V	S	L	A	D	L	I	V	L	G	G	N	A	A	V	E	Q	A	A	A	N	A	G	Y	D	V	E	I	P	F	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	S	T	T	T	T	T		G	G	G																						T		S	S	S	B																						T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	P	G	R	V	D	A	G	P	E	H	T	D	A	P	S	F	D	A	L	K	P	K	V	D	G	V	R	N	Y	I	Q	D	D	I	T	R	P	A	E	E	V	L	V	D	N	A	D	L	L	N	L	T	A	S	E	L	T	A	L	I	G	G	M	R	S	I	G	A	N	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B			S	T	T							G	G	G			S			G	G	G	T				S	S			S													T	T																				G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Q	D	T	D	L	G	V	F	T	D	E	P	E	T	L	T	N	D	F	F	V	N	L	L	D	M	G	T	E	W	E	P	A	A	D	S	E	H	R	Y	K	G	L	D	R	D	T	G	E	V	K	W	E	A	T	R	I	D	L	I	F	G	S	N	D	R	L	R	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G			B	S				S	S	T	T	S		S	S									T	T							S	S		S	S							T	T	T														T	T	T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
Sequence	S	E	V	Y	G	S	A	D	A	E	K	K	L	V	H	D	F	V	D	T	W	S	K	V	M	K	L	D	R	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	G	G	G																	T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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