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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3vd8A_

Fold library idPDB HeaderMoleculeTitle
c3vd8A_PDB header: sugar binding protein,signaling proteinChain: A: PDB Molecule: maltose-binding periplasmic protein, interferon-induciblePDBTitle: crystal structure of human aim2 pyd domain with mbp fusion


Added to library: Tue Jan 22 09:18:34 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGY
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Known secondary structure (DSSP)


TTS

TTS
S



TTTTTT
S
SGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence AQSGLLAEITPAAAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELK
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Known secondary structure (DSSP) TT
B





TTB
TTT
S

TTT
SS

SBSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence AKGKSALMFNLQEPYFTWPLIAADGGYAFKYAAGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDY
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Known secondary structure (DSSP) TTT




SSTT
TTTTSTTSS
TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence SIAEAAFNKGETAMTINGPWAWSNIDTSAVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFL
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Known secondary structure (DSSP) TTS
GGGSS




BBTTB



BTT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence ENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINA
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Known secondary structure (DSSP) TTSSS

SSBTTSTS


STT
 .........360.........370.........380.........390.........400.........410.........420
Sequence ASGRQTVDAALAAAQTNAVDMESKYKEILLLTGLDNITDEELDRFKFFLSDEFNIATGKLHTANRIQVAT
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Known secondary structure (DSSP) TTSS
TS
TTGGGS
TTSSS
SSTTT

 .........430.........440.........450.........460.......
Sequence LMIQNAGAVSAVMKTIRIFQKLNYMLLAKRLQEEKEKVDKQYKSVTK
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Known secondary structure (DSSP)
TT
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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