PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3vayB_

Fold library id	PDB Header	Molecule	Title
c3vayB_	PDB header: hydrolase	Chain: B: PDB Molecule: had-superfamily hydrolase;	PDBTitle: crystal structure of 2-haloacid dehalogenase from pseudomonas syringae2 pv. tomato dc3000

Links to external resources
Added to library: Thu Jan 10 12:21:11 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M I K L V T F D L D D T L W D T A P A I V G A E A A L R D W L A E Q A P K L G P V P V E H L W E I R S R L L D E D P S F K H R I S A L R R R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T T T B
S
T T T
S
G G G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V L F H A L E D A G Y D S D E A Q Q L A D E S F E V F L H G R H Q V Q I F P E V Q P T L E I L A K T F T L G V I T N G N A D V R R L G L A D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T
B
T T T T S S S
G G G T T T G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y F A F A L C A E D L G I G K P D P A P F L E A L R R A K V D A S A A V H V G D H P S D D I A G A Q Q A G M R A I W Y N P Q G K A W D A D R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G
S T
T T S T
G G G S
T T T T T T
T T
S S S

. . . . . . . . . 220 . . . . . . . . . 230

Sequence L P D A E I H N L S Q L P E V L A R W A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S G G G T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	I	K	L	V	T	F	D	L	D	D	T	L	W	D	T	A	P	A	I	V	G	A	E	A	A	L	R	D	W	L	A	E	Q	A	P	K	L	G	P	V	P	V	E	H	L	W	E	I	R	S	R	L	L	D	E	D	P	S	F	K	H	R	I	S	A	L	R	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										B	T	T	T	B		S																				T	T	T		S																		G	G	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	L	F	H	A	L	E	D	A	G	Y	D	S	D	E	A	Q	Q	L	A	D	E	S	F	E	V	F	L	H	G	R	H	Q	V	Q	I	F	P	E	V	Q	P	T	L	E	I	L	A	K	T	F	T	L	G	V	I	T	N	G	N	A	D	V	R	R	L	G	L	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T																						T				B		T	T										T	T	S							S	S				G	G	G	T	T	T	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	F	A	F	A	L	C	A	E	D	L	G	I	G	K	P	D	P	A	P	F	L	E	A	L	R	R	A	K	V	D	A	S	A	A	V	H	V	G	D	H	P	S	D	D	I	A	G	A	Q	Q	A	G	M	R	A	I	W	Y	N	P	Q	G	K	A	W	D	A	D	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G		S									T			T	T	S												T			G	G	G						S		T	T	T	T							T	T								T	T						S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Sequence	L	P	D	A	E	I	H	N	L	S	Q	L	P	E	V	L	A	R	W	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S				S	S	G	G	G							T	T