Fold library entry viewer: c3varA_

Added to library: Thu Jan 10 01:20:43 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	R	A	R	K	E	A	V	Q	A	A	A	R	E	L	L	K	F	V	N	R	S	P	S	P	F	H	A	V	A	E	C	R	S	R	L	L	Q	A	G	F	H	E	L	K	E	T	E	S	W	D	I	K	P	E	S	K	Y	F	L	T	R	N	S	S	T	I	I	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T		S	S															T	T						T	T	S						T	T								T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	V	G	G	Q	Y	V	P	G	N	G	F	S	L	I	G	A	H	T	D	S	P	C	L	R	V	K	R	S	Q	V	G	F	Q	Q	V	G	V	E	T	Y	G	G	G	I	W	S	T	W	F	D	R	D	L	T	L	A	G	R	V	I	V	E	Q	R	L	V	H	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T			T	T																						T	T										S	S			G	G	G	G	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	P	I	L	R	I	P	H	L	A	I	H	L	M	E	M	H	L	V	P	I	L	A	T	S	I	Q	E	E	L	E	K	S	V	L	T	S	L	L	C	A	H	L	G	L	S	P	E	D	I	L	E	M	E	L	C	L	A	D	T	Q	P	A	V	L	G	G	A	Y	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			B	B						T	T			G	G	G	G																										T			G	G	G												S						S	T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	F	I	F	A	P	R	L	D	N	L	H	S	C	F	C	A	L	Q	A	L	I	D	S	C	S	A	P	A	S	L	A	A	D	P	H	V	R	M	I	A	L	Y	D	N	E	E	V	G	S	E	S	A	Q	G	A	Q	S	L	L	T	E	L	V	L	R	R	I	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T																		T	S	S	T								S								S		G	G	G	T	S		S	T	T	S	T	T	S	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	P	Q	H	L	T	A	F	E	E	A	I	P	K	S	Y	M	I	S	A	D	M	A	H	A	V	H	P	N	Y	L	R	P	L	F	H	K	G	P	V	I	K	V	N	S	K	Q	R	Y	A	S	N	A	V	S	E	A	L	I	R	E	V	A	S	S	V	G	V	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		T	T						G	G	G														T	T						T	T	S								T	T	T	T	S																		T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Sequence	Q	D	L	T	T	I	G	P	I	L	A	S	R	L	G	L	R	V	L	D	L	G	S	P	Q	L	A	M	H	S	I	R	E	T	A	C	T	T	G	V	L	Q	T	I	T	L	F	K	G	F	F	E	L	F	P	S	L	S	R	S	L	L	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T												S	T	T	S	S	S					T																							T

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PDB structure

FASTA sequence

Hidden Markov model

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