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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c3v7eB_ | PDB header: ribosomal protein/rna | Chain: B: PDB Molecule: ribosome-associated protein l7ae-like; | PDBTitle: crystal structure of ybxf bound to the sam-i riboswitch aptamer |
Added to library: Sat Mar 10 11:50:52 2012 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | S | Y | D | K | V | S | Q | A | K | S | I | I | I | G | T | K | Q | T | V | K | A | L | K | R | G | S | V | K | E | V | V | V | A | K | D | A | D | P | I | L | T | S | S | V | V | S | L | A | E | D | Q | G | I | S | V | S | M | V | E | S | M | K | K | L | G | K | A | C | G | I |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | T | T | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | S | ![]() | ![]() | B | T | T | S | T | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | ![]() | T | T | T | ![]() | ![]() | B | S | T | T | ![]() | ![]() | ![]() | ![]() | T | T | S |   | . | . | . | . | . | . | . | ||||||||
Sequence | E | V | G | A | A | A | V | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S |
Download: | PDB structure | FASTA sequence |
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