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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3v71A_

Fold library idPDB HeaderMoleculeTitle
c3v71A_PDB header: rna binding protein/rnaChain: A: PDB Molecule: puf (pumilio/fbf) domain-containing protein 7, confirmed byPDBTitle: crystal structure of puf-6 in complex with 5be13 rna


Added to library: Sat Jan 7 23:13:11 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ISLEDVLLNGQLIDFAIDPSGVKFLEANYPLDSEDQIRKAVFEKFTESTTLFVGLCHSRNGNFIVQKLVE
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Known secondary structure (DSSP)

TT
STS
S
TT
S
SSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LATPAEQRELLRQMIDGGLLAMCKDKFACRVVQLALQKFDHSNVFQLIQELSTFDLAAMCTDQISIHVIQ
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Known secondary structure (DSSP) T

T
TSTTS
TS
STTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence RVVKQLPVDMWTFFVHFLSSGDSLMAVCQDKYGCRLVQQVIDRLAENPKLPCFKFRIQLLHSLMTCIVRN
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Known secondary structure (DSSP) TTS
TTTSSTTSTTT

SSSTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence CYRLSSNEFANYVIQYVIKSSGIMEMYRDTIIDKCLLRNLLSMSQDKYASHVIEGAFLFAPPALLHEMME
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Known secondary structure (DSSP) TSTTTT

STTTTT
TTSTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence EIFSVKDVESNRDALDILLFHQYGNYVVQQMISICTAALIELPPAILLLYSGWYEKMKQRVLQHASRLER
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Known secondary structure (DSSP)




SSS


T
TT




TTTTT
 .........360....
Sequence FSSGKKIIDSVMRH
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Known secondary structure (DSSP) S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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