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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3v6tA_

Fold library idPDB HeaderMoleculeTitle
c3v6tA_PDB header: dna binding protein/dnaChain: A: PDB Molecule: dhax3;PDBTitle: crystal structure of the dna-bound dhax3, a tal effector, at 1.852 angstrom


Added to library: Sat Jan 28 16:50:51 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QWSGARALEALLTVAGELRGPPLQLDTGQLLKIAKRGGVTAVEAVHAWRNALTGAPLNLTPEQVVAIASH
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Known secondary structure (DSSP)

TTTSTTT


STTSTTT


SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DGGKQALETVQRLLPVLCQAHGLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDG
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Known secondary structure (DSSP) TTS


SSTTTS


SSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GKQALETVQALLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNGGGK
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Known secondary structure (DSSP) TS


SSTT


SSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence QALETVQRLLPVLCQAHGLTPQQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNSGGKQA
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Known secondary structure (DSSP) TTTS


SS



SSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence LETVQRLLPVLCQAHGLTPQQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQVVAIASHDGGKQALE
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Known secondary structure (DSSP) TTT
S
TSTTTS


SSTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence TVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETV
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Known secondary structure (DSSP) TT


SSTT


SSTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence QRLLPVLCQAHGLTPQQVVAIASNGGGRPALESIVAQLSRPDPALAALTNDHLVALACLGGRPALDAVKK
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Known secondary structure (DSSP) TT


SSTTS

TS
T
 .
Sequence L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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