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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3v65D_

Fold library idPDB HeaderMoleculeTitle
c3v65D_PDB header: protein bindingChain: D: PDB Molecule: low-density lipoprotein receptor-related protein 4;PDBTitle: crystal structure of agrin and lrp4 complex


Added to library: Thu Jan 10 05:40:24 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence CNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNFQCWCEAGYELRPDRR
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Known secondary structure (DSSP)

SSTTSSSS
S
TTS



TTS


TTSS






SSSS

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TT
TTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN
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Known secondary structure (DSSP) SSSS


BSS
SSSS


S
S
GGGTTTTTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWT
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Known secondary structure (DSSP)
SS
S
TTTTTTTTTTS
S

TT
SSTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLP
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Known secondary structure (DSSP)
SSS
TTS
S

SS
S
TTTTTTTTB
TTS
S

SS
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence HPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGKNRCGDNNGGCTH
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Known secondary structure (DSSP) STTTTTTTTTS
S





SS



GGGS




SS
STTTT
SS
 .........360.........370.......
Sequence LCLPSGQNYTCACPTGFRKINSHACAQ
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Known secondary structure (DSSP)

TTS


TT
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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