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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3v47B_

Fold library idPDB HeaderMoleculeTitle
c3v47B_PDB header: immune systemChain: B: PDB Molecule: toll-like receptor 5b and variable lymphocyte receptor b.61PDBTitle: the crystal structure of an innate immune receptor in complex with its2 ligand


Added to library: Sat Mar 3 12:26:13 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFR
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Known secondary structure (DSSP)

TT
TTS

SS




TT



SS



TTTTTT
TT





STT

TTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQP
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Known secondary structure (DSSP) T
TT


TT
TT

TTTTTT
TT


TTS


TSSTTTT
TT



SS


S


 .........150.........160.........170.........180.........190.........200.........210
Sequence ASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITT
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Known secondary structure (DSSP)
GGGGG
TT


TT

BS


TTTTGGGTT

TT
B
TT
STT
S


TTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSK
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Known secondary structure (DSSP)
TTS


TTT


TT
TTTS

TT

SS



TTTTGGGTTS




SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence IFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSY
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Known secondary structure (DSSP)


TTTTTT
TT


TTS



TTTTTT
TT



SS



GGGGTT
TT



S
 .........360.........370.........380.........390.........400.........410.........420
Sequence NHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQ
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Known secondary structure (DSSP) S



TTTTTT
TT



SS

S


TTTTTT
TT



SS
B


TTTTTTT
 .........430.........440.
Sequence KEQGSAKCSGSGKPVRSIICP
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Known secondary structure (DSSP) TS

BBTTT
SBGGG




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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