PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3v2hB_

Fold library id	PDB Header	Molecule	Title
c3v2hB_	PDB header: oxidoreductase	Chain: B: PDB Molecule: d-beta-hydroxybutyrate dehydrogenase;	PDBTitle: the crystal structure of d-beta-hydroxybutyrate dehydrogenase from2 sinorhizobium meliloti

Links to external resources
Added to library: Sat Dec 31 17:17:26 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S X X T K T A V I T G S T S G I G L A I A R T L A K A G A N I V L N G F G A P D E I R T V T D E V A G L S S G T V L H H P A D X T K P S E I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
S S T T
S
T T
S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A D X X A X V A D R F G G A D I L V N N A G V Q F V E K I E D F P V E Q W D R I I A V N L S S S F H T I R G A I P P X K K K G W G R I I N I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S
G G G
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A S A H G L V A S P F K S A Y V A A K H G I X G L T K T V A L E V A E S G V T V N S I C P G Y V L G Q P T K K F I T V E Q V A S L A L Y L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T S
T T
T G G G T
S B
T T
S
B

. . . . . . . . . 220 . . . . . . . . . 230 .

Sequence G D D A A Q I T G T H V S X D G G W T A Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S G G G G G
S
S T T S T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	X	X	T	K	T	A	V	I	T	G	S	T	S	G	I	G	L	A	I	A	R	T	L	A	K	A	G	A	N	I	V	L	N	G	F	G	A	P	D	E	I	R	T	V	T	D	E	V	A	G	L	S	S	G	T	V	L	H	H	P	A	D	X	T	K	P	S	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T							S		S	S													T	T							S																T	T		S	S									T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	D	X	X	A	X	V	A	D	R	F	G	G	A	D	I	L	V	N	N	A	G	V	Q	F	V	E	K	I	E	D	F	P	V	E	Q	W	D	R	I	I	A	V	N	L	S	S	S	F	H	T	I	R	G	A	I	P	P	X	K	K	K	G	W	G	R	I	I	N	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S		S														G	G	G														T																		T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	S	A	H	G	L	V	A	S	P	F	K	S	A	Y	V	A	A	K	H	G	I	X	G	L	T	K	T	V	A	L	E	V	A	E	S	G	V	T	V	N	S	I	C	P	G	Y	V	L	G	Q	P	T	K	K	F	I	T	V	E	Q	V	A	S	L	A	L	Y	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	T	S			T	T																						T	G	G	G	T										S	B				T	T		S		B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Sequence	G	D	D	A	A	Q	I	T	G	T	H	V	S	X	D	G	G	W	T	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	G	G	G	G	G			S						S	T	T	S	T	T