PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3uxyC_

Fold library id	PDB Header	Molecule	Title
c3uxyC_	PDB header: oxidoreductase	Chain: C: PDB Molecule: short-chain dehydrogenase/reductase sdr;	PDBTitle: the crystal structure of short chain dehydrogenase from rhodobacter2 sphaeroides

Links to external resources
Added to library: Sat Dec 31 17:22:09 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence F E G K V A L V T G A A G G I G G A V V T A L R A A G A R V A V A D R A V A G I A A D L H L P G D L R E A A Y A D G L P G A V A A G L G R L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S T T S T T
S S
T T
S
T T S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D I V V N N A G V I S R G R I T E T T D A D W S L S L G V N V E A P F R I C R A A I P L X A A A G G G A I V N V A S C W G L R P G P G H A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
G G G
T T T
B
T T B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y C L T K A A L A S L T Q C X G X D H A P Q G I R I N A V C P N E V N T P X L R T G F A K R G F D P D R A V A E L G R T V P L G R I A E P E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G T S S B
T T T
T T S T T S S
B

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 .

Sequence D I A D V V L F L A S D A A R Y L C G S L V E V N G G K A V A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S G G G T T
S S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	E	G	K	V	A	L	V	T	G	A	A	G	G	I	G	G	A	V	V	T	A	L	R	A	A	G	A	R	V	A	V	A	D	R	A	V	A	G	I	A	A	D	L	H	L	P	G	D	L	R	E	A	A	Y	A	D	G	L	P	G	A	V	A	A	G	L	G	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T						S	S	T	T	S													T	T							S	S			T	T				S							T	T	S																S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	I	V	V	N	N	A	G	V	I	S	R	G	R	I	T	E	T	T	D	A	D	W	S	L	S	L	G	V	N	V	E	A	P	F	R	I	C	R	A	A	I	P	L	X	A	A	A	G	G	G	A	I	V	N	V	A	S	C	W	G	L	R	P	G	P	G	H	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													B		G	G	G														T																	T	T														B			T	T	B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	C	L	T	K	A	A	L	A	S	L	T	Q	C	X	G	X	D	H	A	P	Q	G	I	R	I	N	A	V	C	P	N	E	V	N	T	P	X	L	R	T	G	F	A	K	R	G	F	D	P	D	R	A	V	A	E	L	G	R	T	V	P	L	G	R	I	A	E	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				G	G	G	T									S	S	B											T	T	T												T	T	S	T	T	S	S		B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Sequence	D	I	A	D	V	V	L	F	L	A	S	D	A	A	R	Y	L	C	G	S	L	V	E	V	N	G	G	K	A	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	G	G	G	T	T		S	S							T	T