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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3ux8A_

Fold library idPDB HeaderMoleculeTitle
c3ux8A_PDB header: dna binding proteinChain: A: PDB Molecule: excinuclease abc, a subunit;PDBTitle: crystal structure of uvra


Added to library: Sat Feb 11 15:52:04 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DKIIVKGARAHNLKNIDVEIPRGKLVVLTGLSGSGKSSLAFDTIYAEGQRRYVESPDVDAIEGLSPAISI
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Known secondary structure (DSSP)

STT

STTS
STTSSTTTT



SS


 .........80.........90.........100.........110.........120.........130.........140
Sequence DQKTRSTVGTVTEIYSVIRDRLGFLQNVGLDYLTLSRSAGTLSGGEAQRIRLATQIGSRLTGVLYVLDEP
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Known secondary structure (DSSP) SS



BTT




TT
TT

TT
BGGGS
T


S

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence SIGLHQRDNDRLIATLKSMRDLGNTLIVVEHDEDTMLAADYLIDIGPGAGIHGGEVVAAGTPEEVMNDPN
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Known secondary structure (DSSP) TTT

GGGTT




S
SSSGGG

S
T
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence SLTGQYLSGKKFIPIPAERRRPDGRWLEVVGAREHNLKNVSVKIPLGTFVAVTGVSGSGKSTLVNEVLYK
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Known secondary structure (DSSP)
TTSS




SS




S

STT

STTS
STTSSTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence ALAQKLHRAKAKPGEHRDIRGLEHLDKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVFASTNEAKVRGYK
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Known secondary structure (DSSP)


S


S
S
GGG
S

SS
S
SSTT

TTST

 .........360.........370.........380.........390.........400.........410.........420
Sequence KGRFSFNVKGGRCEACHGDGIVPCEVCHGKRYNRETLEVTYKGKNIAEVLDMTVEDALDFFASIPKIKRK
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Known secondary structure (DSSP) GGGG
TTSTTTB
TTTTT





TTTTT

B
T

BTTB
TSBTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence LETLYDVGLGYMKLGQPATTLSGGEAQRVKLAAELHRRSNGRTLYILDEPTTGLHVDDIARLLDVLHRLV
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Known secondary structure (DSSP) TT
TTSBTT

GGG

S


S
STTTT

 .........500.........510.........520.........530.........540.........550.........560
Sequence DNGDTVLVIEHNLDVIKTADYIIDLGPEGGDRGGQIVAVGTPEEVAEVKESHTGRYLKPILERDRARMQA
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Known secondary structure (DSSP) TT



TT
SSSSGGG


T
TT
 ....
Sequence RYEA
Predicted secondary structure

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Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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