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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c3ut1A_ | PDB header: transcription | Chain: A: PDB Molecule: lethal(3)malignant brain tumor-like protein 3; | PDBTitle: crystal structure of the 3-mbt repeat domain of l3mbtl3 |
Added to library: Sat Dec 31 16:43:02 2011 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | A | W | C | W | A | S | Y | L | E | E | E | K | A | V | A | V | P | A | K | L | F | K | E | H | Q | S | F | P | Y | N | K | N | G | F | K | V | G | M | K | L | E | G | V | D | P | E | H | Q | S | V | Y | C | V | L | T | V | A | E | V | C | G | Y | R | I | K | L | H | F | D | G |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | B | G | G | G | S | T | T | T | S | S | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | Y | S | D | C | Y | D | F | W | V | N | A | D | A | L | D | I | H | P | V | G | W | C | E | K | T | G | H | K | L | H | P | P | K | G | Y | K | E | E | E | F | N | W | Q | T | Y | L | K | T | C | K | A | Q | A | A | P | K | S | L | F | E | N | Q | N | I | T | V | I | P | S | G |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | G | G | G | ![]() | ![]() | ![]() | ![]() | T | T | S | S | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | ![]() | ![]() | T | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | B | G | G | G | T | T | T | T | S |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | F | R | V | G | M | K | L | E | A | V | D | K | K | N | P | S | F | I | C | V | A | T | V | T | D | M | V | D | N | R | F | L | V | H | F | D | N | W | D | E | S | Y | D | Y | W | C | E | A | S | S | P | H | I | H | P | V | G | W | C | K | E | H | R | R | T | L | I | T | P | P |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | G | G | G | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | T |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
Sequence | G | Y | V | K | H | F | S | W | D | K | Y | L | E | E | T | N | S | L | P | A | P | A | R | A | F | K | V | K | P | P | H | G | F | Q | K | K | M | K | L | E | V | V | D | K | R | N | P | M | F | I | R | V | A | T | V | A | D | T | D | D | H | R | V | K | V | H | F | D | G | W |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | B | G | G | G | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S |   | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . |
Sequence | N | N | C | Y | D | Y | W | I | D | A | D | S | P | D | I | H | P | V | G | W | C | S | K | T | G | H | P | L | Q | P | P | L | S | |||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | G | G | G | ![]() | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | B | S |
Download: | PDB structure | FASTA sequence |
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