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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3usaH_

Fold library idPDB HeaderMoleculeTitle
c3usaH_PDB header: immune systemChain: H: PDB Molecule: hla class ii histocompatibility antigen, do beta chain;PDBTitle: mhc class ii homolog structure


Added to library: Sat Nov 10 13:26:44 2012
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence RPDFVIQAKADCYFTNGTEKVQFVVRFIFNLEEYVRFDSDVGMFVALTKLGQPDAEQWNSRLDLLERSRQ
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Known secondary structure (DSSP)




TTTTTTTTT
SSSGGG
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence AVDGVCRHNYRLGAPFTVGRKVQPEVTVYPERTPLLHQHNLLHCSVTGFYPGDIKIKWFLNGQEERAGVM
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Known secondary structure (DSSP) TTT

B

SS


TTS
BSS

TT

SS
 .........150.........160.........170.........180.........
Sequence STGPIRNGDWTFQTVVMLEMTPELGHVYTCLVDHSSLLSPVSVEWRAQS
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Known secondary structure (DSSP)



SSS



TT


TT
SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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