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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3uqzB_

Fold library idPDB HeaderMoleculeTitle
c3uqzB_PDB header: dna binding proteinChain: B: PDB Molecule: dna processing protein dpra;PDBTitle: x-ray structure of dna processing protein a (dpra) from streptococcus2 pneumoniae


Added to library: Sat Sep 1 14:25:05 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XKITNYEIYKLKKSGLTNQQILKVLEYGENVDQELLLGDIADISGCRNPAVFXERYFQIDDAHLSKEFQK
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Known secondary structure (DSSP)
B

TT

GGGTTB

TT
S


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence FPSFSILDDCYPWDLSEIYDAPVLLFYKGNLDLLKFPKVAVVGSRACSKQGAKSVEKVIQGLENELVIVS
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Known secondary structure (DSSP) S
TTSTTS
TSTT

S
GGGGGS

TT

TTT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence GLAKGIDTAAHXAALQNGGKTIAVIGTGLDVFYPKANKRLQDYIGNDHLVLSEYGPGEQPLKFHFPARNR
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Known secondary structure (DSSP)


TTTT


SS
TTS
SSGGGSSS
TT



TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence IIAGLCRGVIVAEAKXRSGSLITCERAXEEGRDVFAIPGSILDGLSDGCHHLIQEGAKLVTSGQDVLAEF
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Known secondary structure (DSSP)
SS

TT
TT




SSSSTTTT

SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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