Fold library entry viewer: c3upyB_

Added to library: Sat Mar 31 11:59:43 2012
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	T	N	V	A	L	V	G	L	A	R	D	L	A	A	R	A	E	T	G	K	P	I	R	I	G	L	I	G	A	G	E	M	G	T	D	I	V	T	Q	V	A	R	M	Q	G	I	E	V	G	A	L	S	A	R	R	L	P	N	T	F	K	A	I	R	T	A	Y	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S															T	T											S											T	T	S	S	S									S	S	T												S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	E	N	A	R	E	A	T	T	E	S	A	M	T	R	A	I	E	A	G	K	I	A	V	T	D	D	N	D	L	I	L	S	N	P	L	I	D	V	I	I	D	A	T	G	I	P	E	V	G	A	E	T	G	I	A	A	I	R	N	G	K	H	L	V	M	M	N	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T					S	S										T	T						S									T	T								S																T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	D	V	T	I	G	P	Y	L	K	A	Q	A	D	K	Q	G	V	I	Y	S	L	G	A	G	D	E	P	S	S	C	M	E	L	I	E	F	V	S	A	L	G	Y	E	V	V	S	A	G	K	G	K	N	N	P	L	N	F	D	A	T	P	D	D	Y	R	Q	E	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T							T	T	S															T	T											S	S				T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	R	N	M	N	V	R	L	L	V	E	F	I	D	G	S	K	T	M	V	E	M	A	A	I	A	N	A	T	G	L	V	P	D	I	A	G	M	H	G	P	R	A	S	I	D	Q	L	S	H	T	L	I	P	Q	A	E	G	G	V	L	S	K	S	G	V	V	D	Y	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T											T	S																			S	S	T	T					B			G	G	G					S	S	B	G	G	G	T	S	S	B	S	S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	G	K	G	V	S	P	G	V	F	V	V	A	K	M	D	H	P	R	L	N	E	R	L	E	D	L	K	I	G	K	G	P	Y	F	T	F	H	R	P	Y	H	L	T	S	L	E	V	P	L	T	V	A	R	V	V	L	H	G	K	T	D	M	V	P	L	P	K	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	T	T			S	S									S										T	T	S		S	S	S											G	G	G	G															S					S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	E	V	C	A	V	A	K	K	D	M	Q	P	G	E	H	L	D	A	I	G	Q	Y	C	Y	R	S	W	I	M	T	V	P	E	A	R	A	A	K	A	I	P	C	G	L	L	Q	N	G	T	V	I	A	P	I	K	K	G	E	L	I	T	Y	A	N	A	A	P	Q	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S		B		T	T		B				T	T	S	S	S														T	T	B			G	G	G		T	T					S		B		T	T		B		B	T	T	T					T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Sequence	G	S	R	I	A	E	L	R	A	L	Q	D	A	M	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T

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PDB structure

FASTA sequence

Hidden Markov model

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