PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3um9A_

Fold library id	PDB Header	Molecule	Title
c3um9A_	PDB header: hydrolase	Chain: A: PDB Molecule: haloacid dehalogenase, type ii;	PDBTitle: crystal structure of the defluorinating l-2-haloacid dehalogenase2 bpro0530

Links to external resources
Added to library: Thu Jan 10 00:18:45 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G M H A I K A V V F D L Y G T L Y D V Y S V R T S C E R I F P G Q G E M V S K M W R Q K Q L E Y T W M R T L M G Q Y Q D F E S A T L D A L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S B T T T B
G G G G S T T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Y T C G S L G L A L D A D G E A H L C S E Y L S L T P F A D V P Q A L Q Q L R A A G L K T A I L S N G S R H S I R Q V V G N S G L T N S F D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T S
B
T T T T
S S
T
G G G
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence H L I S V D E V R L F K P H Q K V Y E L A M D T L H L G E S E I L F V S C N S W D A T G A K Y F G Y P V C W I N R S N G V F D Q L G V V P D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G T T
T T
T
G G G S
T
T T S
S S
S

. . . . . . . . . 220 . . . . .

Sequence I V V S D V G V L A S R F S P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	M	H	A	I	K	A	V	V	F	D	L	Y	G	T	L	Y	D	V	Y	S	V	R	T	S	C	E	R	I	F	P	G	Q	G	E	M	V	S	K	M	W	R	Q	K	Q	L	E	Y	T	W	M	R	T	L	M	G	Q	Y	Q	D	F	E	S	A	T	L	D	A	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S								S	B	T	T	T	B		G	G	G	G								S	T	T																								T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	T	C	G	S	L	G	L	A	L	D	A	D	G	E	A	H	L	C	S	E	Y	L	S	L	T	P	F	A	D	V	P	Q	A	L	Q	Q	L	R	A	A	G	L	K	T	A	I	L	S	N	G	S	R	H	S	I	R	Q	V	V	G	N	S	G	L	T	N	S	F	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T															T	T	S			B		T	T											T	T								S	S													T		G	G	G		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	H	L	I	S	V	D	E	V	R	L	F	K	P	H	Q	K	V	Y	E	L	A	M	D	T	L	H	L	G	E	S	E	I	L	F	V	S	C	N	S	W	D	A	T	G	A	K	Y	F	G	Y	P	V	C	W	I	N	R	S	N	G	V	F	D	Q	L	G	V	V	P	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G	T	T			T	T													T			G	G	G						S												T								T	T	S						S	S				S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Sequence	I	V	V	S	D	V	G	V	L	A	S	R	F	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S							T