Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3ug9A_

Fold library idPDB HeaderMoleculeTitle
c3ug9A_PDB header: membrane proteinChain: A: PDB Molecule: archaeal-type opsin 1, archaeal-type opsin 2;PDBTitle: crystal structure of a protein


Added to library: Sat Jan 28 17:05:32 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RMLFQTSYTLENNGSVICIPNNGQCFCLAWLKSNGTNAEKLAANILQWITFALSALCLMFYCGWEEIYVA
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)

SSB


TTTT


SS

B
S






 .........80.........90.........100.........110.........120.........130.........140
Sequence TIEMIKFIIEYFHEFDEPAVIYSSNGNKTVWLRYAEWLLTCPVILIHLSNLTGLANDYNKRTMGLLVSDI
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP) TTSTTTS
TTS

TTTTS





 .........150.........160.........170.........180.........190.........200.........210
Sequence GTIVWGTTAALSKGYVRVIFFLMGLCYGIYTFFNAAKVYIEAYHTVPKGRCRQVVTGMAWLFFVSWGMFP
Predicted secondary structure






SS confidence





































































Known secondary structure (DSSP) S
S
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ILFILGPEGFGVLSVYGSTVGHTIIDLMSKNCWGLLGHYLRVLIHEHILIHGDIRKTTKLIEVETLVEDE
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP) STTTT
SS
T



S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D