Fold library entry viewer: c3udiA_

Added to library: Sat Dec 17 19:02:14 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	P	L	Q	V	Y	T	A	D	N	Q	L	I	A	E	Y	G	G	K	L	S	I	P	V	E	Y	K	Q	I	P	P	N	F	I	H	A	F	L	A	A	E	D	S	S	F	F	Q	N	L	S	K	E	D	I	L	S	L	Y	V	N	K	I	F	L	G	K	N	A	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S									S	B						G	G	G	S											S	S	S																	T	T	T		B		S	T	T	B	B	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	A	A	A	A	K	I	Y	Y	N	K	S	I	N	E	L	S	I	A	Q	M	A	M	I	A	G	L	P	K	A	P	S	K	Y	N	P	V	V	N	P	E	R	A	L	E	R	R	N	W	I	L	G	R	M	L	Q	L	G	Y	I	S	Q	A	E	Y	Q	K	A	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S			G	G	G											T	S	T	T		T	T	T	S		T	T	T																			T	T	S	S										T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	P	I	N	L	N	M	P	N	R	D	L	N	N	I	H	P	Y	A	G	E	M	V	R	S	E	L	V	K	H	F	G	E	Q	A	I	D	S	G	Y	K	V	Y	T	T	I	N	A	K	R	Q	A	I	A	E	K	A	V	Q	D	G	L	E	A	Y	D	R	R	H	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S	S																	G	G	G	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	W	R	G	A	E	A	H	D	K	P	L	S	E	F	R	A	Y	A	N	T	Y	P	A	Q	V	T	K	V	N	S	S	S	F	E	A	L	M	Q	D	G	S	T	V	T	V	Q	W	S	G	M	S	W	A	R	P	Y	R	N	A	N	S	V	G	A	A	P	S	R	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B				S			S			G	G	G				B	T	T	B										S	S							T	T	S							G	G	G	T	T	T			B				T	T							S	S	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	I	V	K	V	K	D	I	V	R	L	R	P	N	E	A	K	T	A	W	S	L	V	Q	V	P	K	V	Q	G	Q	L	I	A	I	N	P	N	D	G	S	I	E	A	I	V	G	G	Y	N	F	Y	Q	S	K	F	N	R	A	L	Q	G	W	R	Q	P	G	S	T	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	T			T	T									S	S	S	S									S	S									T	T	T		B							S	S		T	T	T											B			G	G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	K	P	F	L	Y	A	L	A	L	E	R	G	M	T	P	Y	S	M	V	N	D	S	P	I	T	I	G	K	W	T	P	K	N	S	D	G	R	Y	L	G	M	I	P	L	R	R	A	L	Y	L	S	R	N	T	V	S	V	R	L	L	Q	T	V	G	I	E	R	T	R	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T			T	T	S									T	T	T						T	T	S														T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	F	M	D	F	G	L	Q	E	D	Q	I	P	R	N	Y	T	I	A	L	G	T	P	Q	V	L	P	I	Q	M	A	T	G	Y	A	T	F	A	N	G	G	Y	R	V	Q	P	H	F	I	Q	R	I	E	D	A	Y	G	K	V	I	Y	E	A	K	P	E	Y	A	C	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T			G	G	G	S		S	S	G	G	G	G	G	T		S		B															T	S	B					B								S	S	S										B	S		S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	P	C	I	N	A	Y	R	Q	A	Q	R	I	L	K	S	S	S	A	Y	D	M	A	N	I	L	R	D	V	I	E	H	G	T	G	K	I	G	R	S	D	L	G	G	K	T	G	T	T	N	D	A	K	D	A	W	F	A	G	F	N	G	K	L	V	T	V	T	W	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G					B			B		S																		T	S					S		S	S									G	G	G										T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600
Sequence	F	D	Q	P	T	T	L	G	R	R	E	Y	G	G	I	A	A	L	P	I	W	I	N	F	M	G	Q	A	L	Q	G	T	P	A	A	W	V	R	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S						T	T							T													T	T

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PDB structure

FASTA sequence

Hidden Markov model

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