PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3ucaB_

Fold library id	PDB Header	Molecule	Title
c3ucaB_	PDB header: transferase	Chain: B: PDB Molecule: geranyltranstransferase;	PDBTitle: crystal structure of isoprenoid synthase (target efi-501974) from2 clostridium perfringens

Links to external resources
Added to library: Sat Nov 19 19:45:34 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A M N I N S L K E E V D Q S L K A Y F N K D R E Y N K V L Y D S M A Y S I N V G G K R I R P I L M L L S Y Y I Y K S D Y K K I L T P A M A I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S S
S
T T
S
G G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E M I H T Y S L I H D D L P C M D N D D L R R G K P T N H K V F G E A I A V L A G D A L L N E A M K I L V D Y S L E E G K S A L K A T K I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S T T T T
S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A D A A G S D G M I G G Q I V D I I N E D S L K E L D Y M H L K K T G E L I K A S I M S G A V L A E A S E G D I K K L E G F G Y K L G L A F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T T T T
T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . .

Sequence Q I K D D I L D V V N N Y I T I F G L E E C K K K C V N I T E E C I E I L S S I K G N T E P L K V L T M K L L E R K F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	M	N	I	N	S	L	K	E	E	V	D	Q	S	L	K	A	Y	F	N	K	D	R	E	Y	N	K	V	L	Y	D	S	M	A	Y	S	I	N	V	G	G	K	R	I	R	P	I	L	M	L	L	S	Y	Y	I	Y	K	S	D	Y	K	K	I	L	T	P	A	M	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T					S	S														S																T	T		S		G	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	M	I	H	T	Y	S	L	I	H	D	D	L	P	C	M	D	N	D	D	L	R	R	G	K	P	T	N	H	K	V	F	G	E	A	I	A	V	L	A	G	D	A	L	L	N	E	A	M	K	I	L	V	D	Y	S	L	E	E	G	K	S	A	L	K	A	T	K	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	S	T	T	T	T			S			T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	D	A	A	G	S	D	G	M	I	G	G	Q	I	V	D	I	I	N	E	D	S	L	K	E	L	D	Y	M	H	L	K	K	T	G	E	L	I	K	A	S	I	M	S	G	A	V	L	A	E	A	S	E	G	D	I	K	K	L	E	G	F	G	Y	K	L	G	L	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	T	T	T											T	T														T															T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Sequence	Q	I	K	D	D	I	L	D	V	V	N	N	Y	I	T	I	F	G	L	E	E	C	K	K	K	C	V	N	I	T	E	E	C	I	E	I	L	S	S	I	K	G	N	T	E	P	L	K	V	L	T	M	K	L	L	E	R	K	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																							T	S	S	S