Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3uaqB_

Fold library idPDB HeaderMoleculeTitle
c3uaqB_PDB header: protein bindingChain: B: PDB Molecule: lbpb b-lobe;PDBTitle: crystal structure of the n-lobe domain of lactoferrin binding protein2 b (lbpb) of moraxella bovis


Added to library: Sat Mar 31 11:56:44 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VLGSVLAIPKRNQAYDKKKLTHLEEHVPLDENNITTAHTNPLPALTKELQERYEGGKIYQSDDKYKFVKA
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)

S


B


TTTTS
S


TTS

SS

STT







SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GWIFTGLRPDETIKTDEDTDQPKQYTKGDGYLYYYGDNPTGVANYTGHWDFVTDVKREREAFGGGSGYKM
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP)


TTS
TTSSS
S
SSB


S





SSSTTSB
 .........150.........160.........170.........180.........190.........200.........210
Sequence DSGFGDEVGATSFAEQVFGQYAPRQGNHRAVFKADFDAKKLTGTLSTKQKAIASSPETYVDRYDIDATIK
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP)
TTBTTTB

BGGGB

TT

SS

S
TTTT

SSS


 .........220.........230.........240.........250.........260.........270...
Sequence GNRFAGSAIAKNTKSSFLEPNFFNKNADNRLEGGFYGENAEELAGKFLTNDNSVFAVFAGKQD
Predicted secondary structure































SS confidence






























































Known secondary structure (DSSP) TTS




SSS

S



STTS

TTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D