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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3uagA_

Fold library idPDB HeaderMoleculeTitle
c3uagA_PDB header: ligaseChain: A: PDB Molecule: protein (udp-n-acetylmuramoyl-l-alanine:d-PDBTitle: udp-n-acetylmuramoyl-l-alanine:d-glutamate ligase


Added to library: Tue Mar 16 12:18:06 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVA
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Known secondary structure (DSSP)


TT



STTT


SSSS
TTGGGS
TTS
SS

TT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence SPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIG
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Known secondary structure (DSSP)
TTS
TTSTT



S

SS
TT

TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LPALMLLDDECELYVLELSSFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAALRIYENAKVCVVN
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Known secondary structure (DSSP) S
GGGG

TT



T





S



S

GGG
TT


GGGTT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence ADDALTMPIERCVSFGVNMGDYHLNHETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRAS
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Known secondary structure (DSSP) TT
GGG






SSSSS


TTGGG
S

STT

 .........290.........300.........310.........320.........330.........340.........350
Sequence SLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLHVDGTLHLLLGGDGKSADFSPLARY
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TTSSTT
TT

STT


SS
SB
TT


GGGGGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence LNGDNVRLYCFGRDGAQLAALRPEVAEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNE
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Known secondary structure (DSSP) S
STTSTTTTSGGG
SSGGG

TT


SSBSTTTSSS
 .........
Sequence FARLAKELG
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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