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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3u5cE_

Fold library idPDB HeaderMoleculeTitle
c3u5cE_PDB header: ribosomeChain: E: PDB Molecule: 40s ribosomal protein s4-a;PDBTitle: the structure of the eukaryotic ribosome at 3.0 a resolution. this2 entry contains proteins of the 40s subunit, ribosome a


Added to library: Thu Jan 10 06:34:40 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVK
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Known secondary structure (DSSP)

S




BTTTS
GGG


SSSSSB




SSSS
GGGTT


SSSTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence VDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGVPYVVT
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Known secondary structure (DSSP) TTB



TT
TT
TTTT

B
SSS
B



TTGGG



GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence HDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIK
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Known secondary structure (DSSP) TTTS

SS

TT

SSSS



SS


SSTTTT
B





TTS

 .........220.........230.........240.........250.........260
Sequence DSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIKLSIAEERDRRRAQQGL
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Known secondary structure (DSSP)
TTS
GGG

SSS

SS


TTTT



TTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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