Fold library entry viewer: c3u48A_

Added to library: Sat Apr 13 08:49:22 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	M	N	Q	F	I	N	A	L	M	A	K	M	T	L	D	E	K	I	G	Q	L	N	L	P	G	A	G	D	I	T	T	G	Q	A	S	S	S	G	I	A	Q	K	I	K	E	G	K	V	G	G	L	F	N	I	K	S	V	T	K	I	K	E	V	Q	R	I	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T										T	T		G	G	G	S	T	T						T	T			S				S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	E	S	R	L	K	I	P	L	L	F	G	M	D	V	I	H	G	Y	E	T	A	F	P	I	P	L	G	L	S	C	T	W	D	M	E	L	I	E	K	S	A	R	I	A	A	I	E	A	S	A	D	G	I	C	W	T	F	S	P	M	V	D	I	S	R	D	P	R	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S											S	S	B	S	S	S	B									T	T																				T	T								B							T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	R	V	S	E	G	S	G	E	D	P	Y	L	G	A	Q	I	A	K	A	M	V	K	G	Y	Q	G	K	D	F	S	D	N	T	S	I	M	A	C	V	K	H	F	A	L	Y	G	A	G	E	A	G	R	D	Y	N	T	V	D	M	S	R	V	R	M	Y	N	E	Y	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	G	G	S			S																		T	T		T	T	S	T	T			B							T	T	G	G	G		G	G	G		T	T														T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	P	P	Y	K	A	A	V	D	A	G	V	G	S	V	M	T	S	F	N	E	I	D	G	I	P	A	T	G	N	K	W	L	M	T	D	V	L	R	K	R	I	G	A	F	K	G	F	V	V	T	D	Y	T	A	I	N	E	M	I	D	H	G	M	G	D	L	Q	T	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T		S						S	S			T	T			G	G	G						T	T	T	T	T		S	T	T				S					S	T	T									T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	L	A	L	R	A	G	V	D	M	D	M	V	G	E	G	F	L	T	T	L	K	K	S	L	Q	E	G	K	I	T	Q	A	Q	I	D	A	A	C	K	R	I	L	E	A	K	Y	K	L	G	L	F	S	D	P	Y	K	Y	C	N	E	E	R	A	R	T	Q	I	F	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T			B			S	S													T	T	S	S																			T	T	T	T	T		T	T	T	T									S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	E	H	R	K	I	A	R	E	I	A	A	Q	S	F	V	L	L	K	N	D	N	N	V	L	P	L	K	K	S	G	T	I	A	L	V	G	P	L	A	D	N	R	V	N	M	P	G	T	W	S	V	A	A	K	H	A	E	S	V	S	L	L	E	G	L	K	K	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T							G	G	G			S			S	S	S						S	T	T	S	S		S	T	T	T	T		S	S		T	T	S		G	G	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	N	D	A	R	I	L	Y	A	H	G	S	N	L	D	E	D	K	S	L	I	E	R	A	T	M	F	G	K	T	L	K	Y	D	P	R	P	K	D	V	V	I	K	E	A	V	D	I	A	N	Q	A	D	V	I	V	A	A	L	G	E	S	A	E	M	S	G	E	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S											S		S	S							T	T		T	T								S														T	T	S	S										G	G	G	S	S	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	S	R	S	N	I	E	I	P	A	L	Q	R	E	L	L	Q	A	L	L	K	T	G	K	P	V	V	L	V	L	F	T	G	R	P	L	A	L	T	W	E	H	E	N	V	P	A	I	L	N	V	W	F	A	G	T	E	A	G	D	A	I	S	D	A	L	F	G	V	V	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S			S	S													T	T		S									S	S												S										T	T										T	T	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	P	S	G	K	L	S	A	T	F	P	R	N	V	G	Q	V	P	I	Y	Y	N	H	K	N	T	G	R	P	L	P	E	G	Q	W	F	Q	K	F	R	S	N	Y	L	D	V	P	N	D	P	L	Y	P	F	G	Y	G	L	S	F	T	K	F	T	Y	G	D	L	K	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S		B		S	S	G	G	G		S			S	S					S	S				T	T					T	T	S	S			S	S	S		S	S		S	B		T	T			B		S	S										S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	S	T	N	L	K	G	N	Q	T	L	T	A	S	I	E	L	T	N	S	G	D	Y	D	G	A	E	V	V	Q	L	Y	I	R	D	L	V	G	S	T	T	R	P	V	K	E	L	K	G	F	Q	K	V	F	L	K	K	G	E	T	K	T	I	T	F	K	I	T	P	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S				S	S													S	S	S																S	S				S													T	T											G	G	G
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.
Sequence	L	K	F	Y	N	Y	D	L	K	Y	D	W	E	P	G	E	F	V	I	M	V	G	G	N	S	R	D	L	K	S	Q	K	I	N	W	L	K	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G					T	T							S									S	S	S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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