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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3u3iA_

Fold library idPDB HeaderMoleculeTitle
c3u3iA_PDB header: rna binding proteinChain: A: PDB Molecule: nucleocapsid protein;PDBTitle: a rna binding protein from crimean-congo hemorrhagic fever virus


Added to library: Sat Mar 31 11:56:54 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MENKIEVNNKDEMNKWFEEFKKGNGLVDTFTNSYSFCESVPNLDRFVFQMASATDDAQKDSIYASALVEA
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Known secondary structure (DSSP)







STTT
B
SSBSS
BS

S



T

SSSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TKFCAPIYECAWVSSTGIVKKGLEWFEKNAGTIKSWDESYTELKVEVPKIEQLADYQQAALKWRKDIGFR
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Known secondary structure (DSSP) TT


STGGG
TTTTS


T

 .........150.........160.........170.........180.........190.........200.........210
Sequence VNANTTALSHKVLAEYKVPGEIVMSVKEMLSDMIRRRNLILREHVEWCREFVKGKYIMAFNPPWGDINKS
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Known secondary structure (DSSP) SSSTTSB

SB

S




TTTTT


T

GGGGS
SSSSTT
B
 .........220.........230.........240.........250.........260.........270.........280
Sequence GRSGIALVATGLAKLAETEKGVFDEAKKTVEALNGYLNKHKDEVDKASADSMITNLLKHIAKAQELYKNS
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Known secondary structure (DSSP) SSSSBTTT


TTGGGS
 .........290.........300.........310.........320.........330.........340.........350
Sequence SALRAQGAQIDTAFSSYYWLYKAGVTPETFPTVSQFLFELGKQPRGTKKMKKALLSTPLKWGKKLYELFA
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Known secondary structure (DSSP) T


T

GGGTT




SSTT

 .........360.........370.........380.........390.........400.........410.........420
Sequence DDRIYMHPAVLTAGRISEMGVCFGTIPVANPDDAAQGSGHTKSILNLRTNTETNNPCAKTIVKLFEIQKT
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Known secondary structure (DSSP)




S
TTS

STTSSS
TT
GGGGGG



GGGGGGB


SSS

 .........430.........440.........450.........460
Sequence GFNIQDMDIVASEHLLHQSLVGKQSPFQNAYNVKGNATSA
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Known secondary structure (DSSP) S
SSSSS

TT
SSTT
B
TT
B






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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