Fold library entry viewer: c3u1kB_

Added to library: Sat Feb 4 17:54:12 2012
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	A	S	A	V	A	V	D	L	G	N	R	K	L	E	I	S	S	G	K	L	A	R	F	A	D	G	S	A	V	V	Q	S	G	D	T	A	V	M	V	T	A	V	S	K	T	K	P	S	P	S	Q	F	M	P	L	V	V	D	Y	R	Q	K	A	A	A	A	G	R	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S								S	S	S		T	T	S	S								T	T											S	S			S	S	S	S										S			T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	T	N	Y	L	G	T	S	D	K	E	I	L	T	S	R	I	I	D	R	S	I	R	P	L	F	P	A	G	Y	F	Y	D	T	Q	V	L	C	N	L	L	A	V	D	G	V	N	E	P	D	V	L	A	I	N	G	A	S	V	A	L	S	L	S	D	I	P	W	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T																			G	G	G	S		T	T																S	S	S																	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	V	G	A	V	R	I	G	I	I	D	G	E	Y	V	V	N	P	T	R	K	E	M	S	S	S	T	L	N	L	V	V	A	G	A	P	K	S	Q	I	V	M	L	E	A	S	A	E	N	I	L	Q	Q	D	F	C	H	A	I	K	V	G	V	K	Y	T	Q	Q	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T					S										S									G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Q	G	I	Q	Q	L	V	K	E	T	G	V	T	K	R	T	P	Q	K	L	F	T	P	S	P	E	I	V	K	Y	T	H	K	L	A	M	E	R	L	Y	A	V	F	T	D	Y	E	H	D	K	V	S	R	D	E	A	V	N	K	I	R	L	D	T	E	E	Q	L	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		S																										T		T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	F	P	E	A	D	P	Y	E	I	I	E	S	F	N	V	V	A	K	E	V	F	R	S	I	V	L	N	E	Y	K	R	C	D	G	R	D	L	T	S	L	R	N	V	S	C	E	V	D	M	F	K	T	L	H	G	S	A	L	F	Q	R	G	Q	T	Q	V	L	C	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S																									S			T	T	S			T	T												S	T	T	S	S								T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	T	F	D	S	L	E	S	G	I	Q	V	I	T	A	I	N	G	I	K	D	K	N	F	M	L	H	Y	E	F	P	P	Y	A	T	N	E	I	G	K	V	T	G	L	N	R	R	E	L	G	H	G	A	L	A	E	K	A	L	Y	P	V	I	P	R	D	F	P	F	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	G	G	G				T	T	T	S	S				G	G	G									G	G	G	G	T						S	S																	G	G	G	S		S	S		S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	R	V	T	S	E	V	L	E	S	N	G	S	S	S	M	A	S	A	C	G	G	S	L	A	L	M	D	S	G	V	P	I	S	S	A	V	A	G	V	A	I	G	L	V	T	K	T	D	P	G	E	I	E	D	Y	R	L	L	T	D	I	L	G	I	E	D	Y	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S																		T				S	S																										S								T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	M	D	F	K	I	A	G	T	N	K	G	I	T	A	L	Q	A	D	I	K	L	P	G	I	P	I	K	I	V	M	E	A	I	Q	Q	A	S	V	A	K	K	E	I	L	Q	I	M	N	K	T	I	S	K	P	R	A	S	R	K	E	N	G	P	V	V	E	T	V	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S									S	S											S	S																															S			S	S			T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.
Sequence	V	P	L	S	K	R	A	K	F	V	G	P	G	G	Y	N	L	K	K	L	Q	A	E	T	G	V	T	I	S	Q	V	D	E	E	T	F	S	V	F	A	P	T	P	S	A	M	H	E	A	R	D	F	I	T	E	I	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S							G	G	G																		S	S	S							S	S													T	T

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PDB structure

FASTA sequence

Hidden Markov model

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