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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3tw6B_

Fold library idPDB HeaderMoleculeTitle
c3tw6B_PDB header: ligase/activatorChain: B: PDB Molecule: pyruvate carboxylase protein;PDBTitle: structure of rhizobium etli pyruvate carboxylase t882a with the2 allosteric activator, acetyl coenzyme-a


Added to library: Wed Jan 9 17:09:36 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GPISKILVANRSEIAIRVFRAANELGIKTVAIWAEEDKLALHRFKADESYQVGRGPHLARDLGPIESYLS
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Known secondary structure (DSSP)






TT

GGGTT
GGGGSSS
S
STT
SS


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence IDEVIRVAKLSGADAIHPGYGLLSESPEFVDACNKAGIIFIGPKADTMRQLGNKVAARNLAISVGVPVVP
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Known secondary structure (DSSP) T
S

SSTTTT
T
SS



-
TT

B

 .........150.........160.........170.........180.........190.........200.........210
Sequence ATEPLAEVAKMAAAIGYPVMLKASWGGGGRGMRVIRSEADLAKEVTEAKREAMAAFGKDEVYLEKLVERA
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Known secondary structure (DSSP)



SSS
SSSS

SS


STSS



SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence RHVESQILGDTHGNVVHLFERDCSVQRRNQKVVERAPAPYLSEAQRQELAAYSLKIAGATNYIGAGTVEY
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Known secondary structure (DSSP)
TTS
TTS
TT

TT

 .........290.........300.........310.........320.........330.........340.........350
Sequence LMDADTGKFYFIEVNPRIQVEHTVTEVVTGIDIVKAQIHILDGAAIGTPQSGVPNQEDIRLNGHALQCRV
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Known secondary structure (DSSP) TTT


S

TT


TT

TTSGGGT


GGG



S
 .........360.........370.........380.........390.........400.........410.........420
Sequence TTEDPEHNFIPDYGRITAYRSASGFGIRLDGGTSYSGAIITRYYDPLLVKVTAWAPNPLEAISRMDRALR
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Known secondary structure (DSSP) STTTTT






STTSS
STT

SSS

SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence EFRIRGVATNLTFLEAIIGHPKFRDNSYTTRFIDTTPELFQQVKRQDRATKLLTYLADVTVNGHPEAKDR
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Known secondary structure (DSSP)
SS

SSTT


TT
GGGS

S


S

TTTTTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence PKPLENAARPVVPYNGNGVKDGTKQLLDTLGPKKFGEWMRNEKRVLLTDTTMRDGHQSLLATRMRTYDIA
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SS
















SS

TTTTT


 .........570.........580.........590.........600.........610.........620.........630
Sequence RIAGTYSHALPNLLSLECWGGATFDVSMRFLTEDPWERLALIREGAPNLLLQMLLRGANGVGYTNYPDNV
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Known secondary structure (DSSP)
TT
STT



TTSTTTBT
SS


 .........640.........650.........660.........670.........680.........690.........700
Sequence VKYFVRQAAKGGIDLFRVFDCLNWVENMRVSMDAIAEENKLCEAAICYTGDILNSARPKYDLKYYTNLAV
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Known secondary structure (DSSP) T


TT

SGGGTT




S
TT
TT
GGG
 .........710.........720.........730.........740.........750.........760.........770
Sequence ELEKAGAHIIAVDMAGLLKPAAAKVLFKALREATGLPIHFHTHDTSGIAAATVLAAVEAGVDAVDAAMDA
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Known secondary structure (DSSP) TT
S

TT




SS




TTS
TT
SB
GG
 .........780.........790.........800.........810.........820.........830.........840
Sequence LSGNTSQPCLGSIVEALSGSERDPGLDPAWIRRISFYWEAVRNQYAAFESDLKGPASEVYLHEMPGGQFT
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Known secondary structure (DSSP) G
STTS

BTTSTT




TTGGG

S

S

TT


 .........850.........860.........870.........880.........890.........900.........910
Sequence NLKEQARSLGLETRWHQVAQAYADANQMFGDIVKVAPSSKVVGDMALMMVSQDLTVADVVSPDREVSFPE
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Known secondary structure (DSSP) TTTTT
TTS



TTT

T
SSS




 .........920.........930.........940.........950.........960.........970.........980
Sequence SVVSMLKGDLGQPPSGWPEALQKKALKGEKPYTVRPGSLLKEADLDAERKVIEKKLEREVSDFEFASYLM
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Known secondary structure (DSSP) TTT


TT


TT




S
GGGGS



TS


 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence YPKVFTDFALASDTYGPVSVLPTPAYFYGLADGEELFADIEKGKTLVIVNQAVSATDSQGMVTVFFELNG
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Known secondary structure (DSSP)


GGGS



TT
SSSS




GGGTT
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence QPRRIKVPDRAHGATVRRKAEPHVGAPMPGVISRVFVSSAGDVLVSIEAMKMETAIHAEKDGEVLVKAGD
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Known secondary structure (DSSP)

SS














SSS






SSS
SS






TT
 ........
Sequence QIDAKDLL
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Known secondary structure (DSSP)
SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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