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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3tw0D_

Fold library idPDB HeaderMoleculeTitle
c3tw0D_PDB header: cell adhesionChain: D: PDB Molecule: cell wall surface anchor family protein;PDBTitle: structural analysis of adhesive tip pilin, gbs104 from group b2 streptococcus agalactiae


Added to library: Sat Mar 30 08:17:49 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PLDVVVLLDNSNSMNNERANNSQRALKAGEAVEKLIDKITSNKDNRVALVTYASTIFDGTEATVSKGVAD
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Known secondary structure (DSSP)

SGGGSTT

TTSTT
SSSB
BS



 .........80.........90.........100.........110.........120.........130.........140
Sequence QNGKALNDSVSWDYHKTTFTATTHNYSYLNLTNDANEVNILKSRIPKEAEHINGDRTLYQFGATFTQKAL
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Known secondary structure (DSSP) TT




TTS
TT



B



T

S



TTS
TTGGGG



 .........150.........160.........170.........180.........190.........200.........210
Sequence MKANEILETQSSNARKKLIFHVTDGVPTMSYAINFNPYISTSYQNQFNSFLNKIPDRSGILQEDFIINGD
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Known secondary structure (DSSP)

TTS
S



B

B


TTSSS
TTSTTSS


GGGB

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DYQIVKGDGESFKLFSDRKVPVTGGTTQAAYRVPQNQLSVMSNEGYAINSGYIYLYWRDYNWVYPFDPKT
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Known secondary structure (DSSP)
B

SS
SB
BSS
B
B
TTSSSB


TTTT


BTT

GGGB
B
B
TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence KKVSATKQIKTHGEPTTLYFNGNIRPKGYDIFTVGIGVNGDPGATPLEAEKFMQSISSKTENYCNVDDTN
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Known secondary structure (DSSP)

B
SS

B
BSTGGG

SS
S
TTTS
TSSSGGGTT
 .......
Sequence CIYDELN
Predicted secondary structure

SS confidence






Known secondary structure (DSSP) T



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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