Fold library entry viewer: c3ttsD_

Added to library: Sat Mar 24 12:11:46 2012
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	I	N	E	K	F	P	K	I	W	Y	G	G	D	Y	N	P	E	Q	W	D	K	A	T	M	E	E	D	M	R	M	F	N	L	A	G	I	D	V	A	T	V	N	V	F	S	W	A	K	I	Q	R	D	E	V	S	Y	D	F	T	W	L	D	D	I	I	E	R	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	T	T	S		S									G	G	G	S																T								S	S							S	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	E	N	I	Y	L	C	L	A	T	S	T	G	A	H	P	A	W	M	A	K	K	Y	P	D	V	L	R	V	D	Y	E	G	R	K	R	K	F	G	G	R	H	N	S	C	P	N	S	P	T	Y	R	K	Y	A	K	I	L	A	G	K	L	A	E	R	Y	K	D	H	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T								S	T	T	S										G	G	G	B		B		T	T	S		B			S		S	S	S		B		T	T																				T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	I	V	M	W	H	V	S	N	E	Y	G	G	Y	C	Y	C	D	N	C	E	K	Q	F	R	V	W	L	K	E	R	Y	G	T	L	E	A	L	N	K	A	W	N	T	S	F	W	S	H	T	F	Y	D	W	D	E	I	V	A	P	N	A	L	S	E	E	W	S	G	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S							S	S								S																S	S									T	T	T	G	G	G				S	S	G	G	G					S	T	T	T	T			T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	T	N	F	Q	G	I	S	L	D	Y	R	R	F	Q	S	D	S	L	L	E	C	F	K	M	E	R	D	E	L	K	R	W	T	P	D	I	P	V	T	T	N	L	M	G	F	Y	P	E	L	D	Y	F	K	W	A	K	E	M	D	V	V	S	W	D	N	Y	P	S	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																																T	T	S								T	T		T	T	S							T	T		S	S									T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	T	P	F	S	F	T	A	M	A	H	N	L	M	R	G	L	K	S	G	Q	P	F	M	L	M	E	Q	T	P	G	V	Q	N	W	Q	P	Y	N	S	A	K	R	P	G	V	M	R	L	W	S	Y	Q	A	V	A	H	G	A	D	T	V	M	F	F	Q	L	R	R	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																T	T	T	T										S	S			S	S	S	S	S						T	T												T	T							S		S	B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	G	A	C	E	K	Y	H	G	A	V	I	E	H	V	G	H	E	H	T	R	V	F	R	E	C	A	E	L	G	K	E	L	Q	Q	L	G	D	T	I	L	D	A	R	S	E	A	K	V	A	V	M	Y	D	W	E	N	R	W	A	L	E	L	S	S	G	P	S	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	T	T	T	T	S			S	B		T	T		S	S		S																	T	T	S	S	T	T		B				S																S			S		T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	N	Y	V	N	E	V	H	K	Y	Y	D	A	L	Y	K	Q	N	I	Q	T	D	M	I	S	V	E	E	D	L	S	K	Y	K	V	V	I	A	P	V	M	Y	M	V	K	P	G	F	A	E	R	V	E	R	F	V	A	Q	G	G	T	F	V	T	T	F	F	S	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T								T	T	S			T	T		S					T	T			B			T	T											T	T							T	T		S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	V	N	E	N	D	L	V	T	L	G	G	Y	P	G	E	L	R	N	V	M	G	I	W	A	E	E	I	D	A	L	L	P	G	H	Q	N	E	I	V	L	R	Q	D	W	G	G	L	R	G	S	Y	S	C	G	I	L	C	D	V	I	H	A	E	T	A	E	V	L	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B		T	T	S		B			S	S	B	T	G	G	G					T											T	T								S	S		B	T	T	B		S														S	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Y	G	A	D	Y	Y	K	G	T	P	V	L	T	R	N	K	F	G	N	G	Q	S	Y	Y	V	A	S	S	P	D	A	D	F	L	Q	G	L	I	A	N	L	C	E	E	Q	G	V	K	P	L	L	N	T	P	D	G	V	E	V	A	E	R	V	K	N	G	T	S	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	T	T	T	T	S									T	T																											T				S					T	T									T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.
Sequence	F	V	M	N	H	N	A	E	E	M	T	F	D	A	G	A	S	R	Q	R	D	L	L	T	G	K	T	I	S	G	Q	A	T	I	P	A	R	G	V	M	I	L	E	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S								S	S					T	T	T						S						T	T

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PDB structure

FASTA sequence

Hidden Markov model

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